RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
CHMP6-203ENST00000572525 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
CHMP6-203ENST00000572525 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
CHMP6-203ENST00000572525 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
CHMP6-203ENST00000572525 PLAC4Q8WY50 150 aa4.1□□□□□ -1.75
CHMP6-203ENST00000572525 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
CHMP6-203ENST00000572525 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
CHMP6-203ENST00000572525 R4GN34 69 aa4.08□□□□□ -1.76
CHMP6-203ENST00000572525 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
CHMP6-203ENST00000572525 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
CHMP6-203ENST00000572525 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
CHMP6-203ENST00000572525 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
CHMP6-203ENST00000572525 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
CHMP6-203ENST00000572525 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
CHMP6-203ENST00000572525 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
CHMP6-203ENST00000572525 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
CHMP6-203ENST00000572525 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
CHMP6-203ENST00000572525 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
CHMP6-203ENST00000572525 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
CHMP6-203ENST00000572525 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
CHMP6-203ENST00000572525 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
CHMP6-203ENST00000572525 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
CHMP6-203ENST00000572525 TNP1P09430 55 aa3.85□□□□□ -1.79
CHMP6-203ENST00000572525 MT4P47944 62 aa3.85□□□□□ -1.79
CHMP6-203ENST00000572525 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
CHMP6-203ENST00000572525 MT1EP04732 61 aa3.79□□□□□ -1.8
CHMP6-203ENST00000572525 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
CHMP6-203ENST00000572525 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
CHMP6-203ENST00000572525 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
CHMP6-203ENST00000572525 MT1GP13640 62 aa3.75□□□□□ -1.81
CHMP6-203ENST00000572525 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
CHMP6-203ENST00000572525 MT1MQ8N339 61 aa3.64□□□□□ -1.83
CHMP6-203ENST00000572525 INE1O15225 51 aa3.63□□□□□ -1.83
CHMP6-203ENST00000572525 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
CHMP6-203ENST00000572525 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
CHMP6-203ENST00000572525 MT1LQ93083 61 aa3.54□□□□□ -1.84
CHMP6-203ENST00000572525 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
CHMP6-203ENST00000572525 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
CHMP6-203ENST00000572525 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
CHMP6-203ENST00000572525 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
CHMP6-203ENST00000572525 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
CHMP6-203ENST00000572525 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.87
CHMP6-203ENST00000572525 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
CHMP6-203ENST00000572525 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
CHMP6-203ENST00000572525 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
CHMP6-203ENST00000572525 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
CHMP6-203ENST00000572525 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
CHMP6-203ENST00000572525 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
CHMP6-203ENST00000572525 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
CHMP6-203ENST00000572525 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
CHMP6-203ENST00000572525 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
CHMP6-203ENST00000572525 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
CHMP6-203ENST00000572525 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
CHMP6-203ENST00000572525 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
CHMP6-203ENST00000572525 MT1AP04731 61 aa3.03□□□□□ -1.92
CHMP6-203ENST00000572525 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
CHMP6-203ENST00000572525 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
CHMP6-203ENST00000572525 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
CHMP6-203ENST00000572525 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
CHMP6-203ENST00000572525 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
CHMP6-203ENST00000572525 MT3P25713 68 aa2.79□□□□□ -1.96
CHMP6-203ENST00000572525 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
CHMP6-203ENST00000572525 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
CHMP6-203ENST00000572525 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
CHMP6-203ENST00000572525 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
CHMP6-203ENST00000572525 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
CHMP6-203ENST00000572525 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
CHMP6-203ENST00000572525 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
CHMP6-203ENST00000572525 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
CHMP6-203ENST00000572525 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
CHMP6-203ENST00000572525 PRM1P04553 51 aa2.32□□□□□ -2.04
CHMP6-203ENST00000572525 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
CHMP6-203ENST00000572525 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
CHMP6-203ENST00000572525 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
CHMP6-203ENST00000572525 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
CHMP6-203ENST00000572525 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
CHMP6-203ENST00000572525 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
CHMP6-203ENST00000572525 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 1322.1 ms