RNA–Protein interactions for RNA: ENST00000570856.1

GABARAP-202, Transcript of GABA type A receptor-associated protein, humanhuman

TSL 2

Gene GABARAP, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAP-202ENST00000570856 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
GABARAP-202ENST00000570856 KMT2DO14686 5537 aa5.14□□□□□ -1.59
GABARAP-202ENST00000570856 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
GABARAP-202ENST00000570856 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
GABARAP-202ENST00000570856 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
GABARAP-202ENST00000570856 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
GABARAP-202ENST00000570856 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
GABARAP-202ENST00000570856 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
GABARAP-202ENST00000570856 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
GABARAP-202ENST00000570856 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
GABARAP-202ENST00000570856 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
GABARAP-202ENST00000570856 MT1EP04732 61 aa4.97□□□□□ -1.61
GABARAP-202ENST00000570856 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
GABARAP-202ENST00000570856 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
GABARAP-202ENST00000570856 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
GABARAP-202ENST00000570856 LCE1AQ5T7P2 110 aa4.85□□□□□ -1.63
GABARAP-202ENST00000570856 MT1LQ93083 61 aa4.84□□□□□ -1.63
GABARAP-202ENST00000570856 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
GABARAP-202ENST00000570856 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
GABARAP-202ENST00000570856 MT1GP13640 62 aa4.79□□□□□ -1.64
GABARAP-202ENST00000570856 SPRR2EP22531 72 aa4.78□□□□□ -1.64
GABARAP-202ENST00000570856 SPRR2BP35325 72 aa4.78□□□□□ -1.64
GABARAP-202ENST00000570856 SPRR2AP35326 72 aa4.78□□□□□ -1.64
GABARAP-202ENST00000570856 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
GABARAP-202ENST00000570856 NEBP20929 6669 aa4.74□□□□□ -1.65
GABARAP-202ENST00000570856 MT1MQ8N339 61 aa4.69□□□□□ -1.66
GABARAP-202ENST00000570856 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
GABARAP-202ENST00000570856 SPRR2DP22532 72 aa4.62□□□□□ -1.67
GABARAP-202ENST00000570856 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
GABARAP-202ENST00000570856 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
GABARAP-202ENST00000570856 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
GABARAP-202ENST00000570856 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
GABARAP-202ENST00000570856 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
GABARAP-202ENST00000570856 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
GABARAP-202ENST00000570856 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
GABARAP-202ENST00000570856 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
GABARAP-202ENST00000570856 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
GABARAP-202ENST00000570856 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
GABARAP-202ENST00000570856 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
GABARAP-202ENST00000570856 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
GABARAP-202ENST00000570856 MT1AP04731 61 aa4.13□□□□□ -1.75
GABARAP-202ENST00000570856 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
GABARAP-202ENST00000570856 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
GABARAP-202ENST00000570856 MT3P25713 68 aa4.01□□□□□ -1.77
GABARAP-202ENST00000570856 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
GABARAP-202ENST00000570856 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
GABARAP-202ENST00000570856 MT4P47944 62 aa3.97□□□□□ -1.77
GABARAP-202ENST00000570856 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
GABARAP-202ENST00000570856 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
GABARAP-202ENST00000570856 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
GABARAP-202ENST00000570856 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
GABARAP-202ENST00000570856 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
GABARAP-202ENST00000570856 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
GABARAP-202ENST00000570856 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
GABARAP-202ENST00000570856 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
GABARAP-202ENST00000570856 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
GABARAP-202ENST00000570856 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
GABARAP-202ENST00000570856 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
GABARAP-202ENST00000570856 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
GABARAP-202ENST00000570856 GPR98Q8WXG9 6306 aa3.4□□□□□ -1.87
GABARAP-202ENST00000570856 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
GABARAP-202ENST00000570856 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
GABARAP-202ENST00000570856 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
GABARAP-202ENST00000570856 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
GABARAP-202ENST00000570856 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
GABARAP-202ENST00000570856 INE1O15225 51 aa3.2□□□□□ -1.9
GABARAP-202ENST00000570856 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
GABARAP-202ENST00000570856 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
GABARAP-202ENST00000570856 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
GABARAP-202ENST00000570856 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
GABARAP-202ENST00000570856 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
GABARAP-202ENST00000570856 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
GABARAP-202ENST00000570856 PRM1P04553 51 aa2.75□□□□□ -1.97
GABARAP-202ENST00000570856 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
GABARAP-202ENST00000570856 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
GABARAP-202ENST00000570856 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
GABARAP-202ENST00000570856 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
GABARAP-202ENST00000570856 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms