RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 KRTAP19-5Q3LI72 72 aa7.68□□□□□ -1.18
RPA1-202ENST00000570451 K7ERS5 55 aa7.61□□□□□ -1.19
RPA1-202ENST00000570451 MT1GP13640 62 aa7.6□□□□□ -1.19
RPA1-202ENST00000570451 CDC42SE1Q9NRR8 79 aa7.58□□□□□ -1.2
RPA1-202ENST00000570451 PP632Q6XCG6 107 aa7.56□□□□□ -1.2
RPA1-202ENST00000570451 MT1MQ8N339 61 aa7.49□□□□□ -1.21
RPA1-202ENST00000570451 HMCN1Q96RW7 5635 aa7.49□□□□□ -1.21
RPA1-202ENST00000570451 LCE1DQ5T752 114 aa7.48□□□□□ -1.21
RPA1-202ENST00000570451 MT1LQ93083 61 aa7.47□□□□□ -1.21
RPA1-202ENST00000570451 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
RPA1-202ENST00000570451 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
RPA1-202ENST00000570451 MT4P47944 62 aa7.41□□□□□ -1.22
RPA1-202ENST00000570451 TNP1P09430 55 aa7.4□□□□□ -1.22
RPA1-202ENST00000570451 LCE4AQ5TA78 99 aa7.4□□□□□ -1.22
RPA1-202ENST00000570451 BRK1Q8WUW1 75 aa7.4□□□□□ -1.22
RPA1-202ENST00000570451 KRTAP4-3Q9BYR4 195 aa7.35□□□□□ -1.23
RPA1-202ENST00000570451 AHNAK2Q8IVF2 5795 aa7.31□□□□□ -1.24
RPA1-202ENST00000570451 KRTAP5-4Q6L8H1 288 aa7.2□□□□□ -1.26
RPA1-202ENST00000570451 ROMO1P60602 79 aa7.19□□□□□ -1.26
RPA1-202ENST00000570451 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
RPA1-202ENST00000570451 KRTAP4-6Q9BYQ5 205 aa7.14□□□□□ -1.27
RPA1-202ENST00000570451 KRTAP12-3P60328 96 aa7.13□□□□□ -1.27
RPA1-202ENST00000570451 KRTAP4-7Q9BYR0 210 aa7.13□□□□□ -1.27
RPA1-202ENST00000570451 KRTAP5-10Q6L8G5 202 aa7.01□□□□□ -1.29
RPA1-202ENST00000570451 PRO0628Q9UI54 55 aa6.99□□□□□ -1.29
RPA1-202ENST00000570451 PMAIP1Q13794 54 aa6.97□□□□□ -1.29
RPA1-202ENST00000570451 KRTAP23-1A1A580 65 aa6.89□□□□□ -1.31
RPA1-202ENST00000570451 KRTAP20-2Q3LI61 65 aa6.85□□□□□ -1.31
RPA1-202ENST00000570451 KRTAP5-5Q701N2 237 aaPredicted RBP6.85□□□□□ -1.31
RPA1-202ENST00000570451 KRTAP5-3Q6L8H2 238 aa6.82□□□□□ -1.32
RPA1-202ENST00000570451 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
RPA1-202ENST00000570451 SPRR5A0A1B0GTR4 108 aa6.77□□□□□ -1.33
RPA1-202ENST00000570451 KRTAP12-4P60329 112 aa6.77□□□□□ -1.33
RPA1-202ENST00000570451 KRTAP5-7Q6L8G8 165 aa6.76□□□□□ -1.33
RPA1-202ENST00000570451 SYNE1Q8NF91 8797 aaKnown RBP6.67□□□□□ -1.34
RPA1-202ENST00000570451 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
RPA1-202ENST00000570451 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
RPA1-202ENST00000570451 PRAC1Q96KF2 57 aa6.58□□□□□ -1.36
RPA1-202ENST00000570451 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
RPA1-202ENST00000570451 KTN1-AS1Q86SY8 53 aa6.54□□□□□ -1.36
RPA1-202ENST00000570451 SVIPQ8NHG7 77 aa6.48□□□□□ -1.37
RPA1-202ENST00000570451 MT1AP04731 61 aa6.34□□□□□ -1.39
RPA1-202ENST00000570451 KRTAP6-1Q3LI64 71 aa6.34□□□□□ -1.39
RPA1-202ENST00000570451 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
RPA1-202ENST00000570451 KRTAP5-2Q701N4 177 aa6.28□□□□□ -1.4
RPA1-202ENST00000570451 KRTAP9-6A8MVA2 160 aa6.17□□□□□ -1.42
RPA1-202ENST00000570451 KRTAP9-4Q9BYQ2 154 aa6.15□□□□□ -1.42
RPA1-202ENST00000570451 AHNAKQ09666 5890 aaKnown RBP6.1□□□□□ -1.43
RPA1-202ENST00000570451 KRTAP6-2Q3LI66 62 aa6.1□□□□□ -1.43
RPA1-202ENST00000570451 KRTAP5-8O75690 187 aa6.07□□□□□ -1.44
RPA1-202ENST00000570451 MUC5BQ9HC84 5762 aaPredicted RBP6.07□□□□□ -1.44
RPA1-202ENST00000570451 OBSCNQ5VST9 7968 aa6.02□□□□□ -1.45
RPA1-202ENST00000570451 MUC5ACP98088 5654 aa6.01□□□□□ -1.45
RPA1-202ENST00000570451 MT3P25713 68 aa5.83□□□□□ -1.48
RPA1-202ENST00000570451 KRTAP9-9Q9BYP9 154 aa5.83□□□□□ -1.48
RPA1-202ENST00000570451 KRTAP5-1Q6L8H4 278 aa5.67□□□□□ -1.5
RPA1-202ENST00000570451 H3BS24 57 aa5.5□□□□□ -1.53
RPA1-202ENST00000570451 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
RPA1-202ENST00000570451 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
RPA1-202ENST00000570451 LCE1BQ5T7P3 118 aa5.14□□□□□ -1.59
RPA1-202ENST00000570451 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
RPA1-202ENST00000570451 NDUFAF8A1L188 74 aa5□□□□□ -1.61
RPA1-202ENST00000570451 LCE1CQ5T751 118 aa4.98□□□□□ -1.61
RPA1-202ENST00000570451 A0A0A0MQY5 61 aa4.95□□□□□ -1.62
RPA1-202ENST00000570451 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
RPA1-202ENST00000570451 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
RPA1-202ENST00000570451 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
RPA1-202ENST00000570451 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
RPA1-202ENST00000570451 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
RPA1-202ENST00000570451 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
RPA1-202ENST00000570451 KRTAP21-2Q3LI59 83 aa4.15□□□□□ -1.75
RPA1-202ENST00000570451 PHGR1C9JFL3 82 aa4.13□□□□□ -1.75
RPA1-202ENST00000570451 INE1O15225 51 aa4.11□□□□□ -1.75
RPA1-202ENST00000570451 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
RPA1-202ENST00000570451 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
RPA1-202ENST00000570451 PRM1P04553 51 aa3.71□□□□□ -1.82
RPA1-202ENST00000570451 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
RPA1-202ENST00000570451 MUC16Q8WXI7 14507 aa2.63□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms