RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
NPLOC4-204ENST00000570324 H3BS24 57 aa3.47□□□□□ -1.85
NPLOC4-204ENST00000570324 A0A0D9SG42 100 aa3.45□□□□□ -1.86
NPLOC4-204ENST00000570324 SPINT4Q6UDR6 99 aa3.43□□□□□ -1.86
NPLOC4-204ENST00000570324 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.87
NPLOC4-204ENST00000570324 PP632Q6XCG6 107 aa3.38□□□□□ -1.87
NPLOC4-204ENST00000570324 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
NPLOC4-204ENST00000570324 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
NPLOC4-204ENST00000570324 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
NPLOC4-204ENST00000570324 C10orf95Q9H7T3 257 aa3.32□□□□□ -1.88
NPLOC4-204ENST00000570324 MT1EP04732 61 aa3.31□□□□□ -1.88
NPLOC4-204ENST00000570324 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
NPLOC4-204ENST00000570324 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
NPLOC4-204ENST00000570324 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
NPLOC4-204ENST00000570324 MT1GP13640 62 aa3.24□□□□□ -1.89
NPLOC4-204ENST00000570324 KRTAP4-9Q9BYQ8 210 aa3.24□□□□□ -1.89
NPLOC4-204ENST00000570324 TNP1P09430 55 aa3.21□□□□□ -1.9
NPLOC4-204ENST00000570324 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
NPLOC4-204ENST00000570324 MT1MQ8N339 61 aa3.17□□□□□ -1.9
NPLOC4-204ENST00000570324 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
NPLOC4-204ENST00000570324 MT1LQ93083 61 aa3.16□□□□□ -1.9
NPLOC4-204ENST00000570324 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.9
NPLOC4-204ENST00000570324 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
NPLOC4-204ENST00000570324 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
NPLOC4-204ENST00000570324 MT4P47944 62 aa3.14□□□□□ -1.91
NPLOC4-204ENST00000570324 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
NPLOC4-204ENST00000570324 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
NPLOC4-204ENST00000570324 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
NPLOC4-204ENST00000570324 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
NPLOC4-204ENST00000570324 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
NPLOC4-204ENST00000570324 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
NPLOC4-204ENST00000570324 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
NPLOC4-204ENST00000570324 KRTAP4-7Q9BYR0 210 aa3□□□□□ -1.93
NPLOC4-204ENST00000570324 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
NPLOC4-204ENST00000570324 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
NPLOC4-204ENST00000570324 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
NPLOC4-204ENST00000570324 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
NPLOC4-204ENST00000570324 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
NPLOC4-204ENST00000570324 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
NPLOC4-204ENST00000570324 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
NPLOC4-204ENST00000570324 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
NPLOC4-204ENST00000570324 INE1O15225 51 aa2.86□□□□□ -1.95
NPLOC4-204ENST00000570324 LOC100996750A0A140TA64 210 aa2.85□□□□□ -1.95
NPLOC4-204ENST00000570324 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
NPLOC4-204ENST00000570324 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
NPLOC4-204ENST00000570324 MT1AP04731 61 aa2.7□□□□□ -1.98
NPLOC4-204ENST00000570324 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
NPLOC4-204ENST00000570324 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
NPLOC4-204ENST00000570324 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
NPLOC4-204ENST00000570324 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
NPLOC4-204ENST00000570324 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
NPLOC4-204ENST00000570324 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
NPLOC4-204ENST00000570324 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
NPLOC4-204ENST00000570324 KRTAP5-8O75690 187 aa2.55□□□□□ -2
NPLOC4-204ENST00000570324 MT3P25713 68 aa2.5□□□□□ -2.01
NPLOC4-204ENST00000570324 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
NPLOC4-204ENST00000570324 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
NPLOC4-204ENST00000570324 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
NPLOC4-204ENST00000570324 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
NPLOC4-204ENST00000570324 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
NPLOC4-204ENST00000570324 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
NPLOC4-204ENST00000570324 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
NPLOC4-204ENST00000570324 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
NPLOC4-204ENST00000570324 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
NPLOC4-204ENST00000570324 KRTAP4-2Q9BYR5 136 aa2.14□□□□□ -2.07
NPLOC4-204ENST00000570324 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
NPLOC4-204ENST00000570324 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
NPLOC4-204ENST00000570324 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
NPLOC4-204ENST00000570324 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
NPLOC4-204ENST00000570324 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
NPLOC4-204ENST00000570324 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
NPLOC4-204ENST00000570324 PRM1P04553 51 aa1.87□□□□□ -2.11
NPLOC4-204ENST00000570324 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
NPLOC4-204ENST00000570324 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
NPLOC4-204ENST00000570324 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
NPLOC4-204ENST00000570324 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
NPLOC4-204ENST00000570324 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
NPLOC4-204ENST00000570324 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms