RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
CNOT1-217ENST00000569263 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
CNOT1-217ENST00000569263 LCE3AQ5TA76 89 aa4.89□□□□□ -1.63
CNOT1-217ENST00000569263 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
CNOT1-217ENST00000569263 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
CNOT1-217ENST00000569263 KRTAP19-7Q3SYF9 63 aa4.87□□□□□ -1.63
CNOT1-217ENST00000569263 NEBP20929 6669 aa4.86□□□□□ -1.63
CNOT1-217ENST00000569263 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
CNOT1-217ENST00000569263 MT1EP04732 61 aa4.83□□□□□ -1.64
CNOT1-217ENST00000569263 ROMO1P60602 79 aa4.81□□□□□ -1.64
CNOT1-217ENST00000569263 SPRR2DP22532 72 aa4.78□□□□□ -1.64
CNOT1-217ENST00000569263 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
CNOT1-217ENST00000569263 KRTAP20-1Q3LI63 56 aa4.76□□□□□ -1.65
CNOT1-217ENST00000569263 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
CNOT1-217ENST00000569263 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
CNOT1-217ENST00000569263 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
CNOT1-217ENST00000569263 KRTAP2-3P0C7H8 128 aa4.69□□□□□ -1.66
CNOT1-217ENST00000569263 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
CNOT1-217ENST00000569263 MT1LQ93083 61 aa4.66□□□□□ -1.66
CNOT1-217ENST00000569263 MT1GP13640 62 aa4.65□□□□□ -1.67
CNOT1-217ENST00000569263 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
CNOT1-217ENST00000569263 MT1MQ8N339 61 aa4.58□□□□□ -1.68
CNOT1-217ENST00000569263 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
CNOT1-217ENST00000569263 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
CNOT1-217ENST00000569263 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
CNOT1-217ENST00000569263 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
CNOT1-217ENST00000569263 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
CNOT1-217ENST00000569263 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
CNOT1-217ENST00000569263 PRO0628Q9UI54 55 aa4.41□□□□□ -1.7
CNOT1-217ENST00000569263 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
CNOT1-217ENST00000569263 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
CNOT1-217ENST00000569263 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
CNOT1-217ENST00000569263 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
CNOT1-217ENST00000569263 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
CNOT1-217ENST00000569263 MT4P47944 62 aa4.16□□□□□ -1.74
CNOT1-217ENST00000569263 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
CNOT1-217ENST00000569263 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-217ENST00000569263 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
CNOT1-217ENST00000569263 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.77
CNOT1-217ENST00000569263 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
CNOT1-217ENST00000569263 SVIPQ8NHG7 77 aa4□□□□□ -1.77
CNOT1-217ENST00000569263 MT1AP04731 61 aa3.99□□□□□ -1.77
CNOT1-217ENST00000569263 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
CNOT1-217ENST00000569263 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
CNOT1-217ENST00000569263 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
CNOT1-217ENST00000569263 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
CNOT1-217ENST00000569263 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
CNOT1-217ENST00000569263 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
CNOT1-217ENST00000569263 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
CNOT1-217ENST00000569263 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
CNOT1-217ENST00000569263 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
CNOT1-217ENST00000569263 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
CNOT1-217ENST00000569263 MT3P25713 68 aa3.63□□□□□ -1.83
CNOT1-217ENST00000569263 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
CNOT1-217ENST00000569263 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
CNOT1-217ENST00000569263 KRTAP5-7Q6L8G8 165 aa3.5□□□□□ -1.85
CNOT1-217ENST00000569263 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
CNOT1-217ENST00000569263 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
CNOT1-217ENST00000569263 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
CNOT1-217ENST00000569263 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
CNOT1-217ENST00000569263 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
CNOT1-217ENST00000569263 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
CNOT1-217ENST00000569263 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
CNOT1-217ENST00000569263 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
CNOT1-217ENST00000569263 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CNOT1-217ENST00000569263 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
CNOT1-217ENST00000569263 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
CNOT1-217ENST00000569263 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
CNOT1-217ENST00000569263 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
CNOT1-217ENST00000569263 INE1O15225 51 aa2.58□□□□□ -2
CNOT1-217ENST00000569263 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
CNOT1-217ENST00000569263 LCE1FQ5T754 118 aa2.56□□□□□ -2
CNOT1-217ENST00000569263 PRM1P04553 51 aa2.48□□□□□ -2.01
CNOT1-217ENST00000569263 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
CNOT1-217ENST00000569263 H3BS24 57 aa2.1□□□□□ -2.07
CNOT1-217ENST00000569263 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
CNOT1-217ENST00000569263 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
CNOT1-217ENST00000569263 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms