RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
USB1-215ENST00000569252 LCE3AQ5TA76 89 aa6.04□□□□□ -1.44
USB1-215ENST00000569252 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
USB1-215ENST00000569252 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
USB1-215ENST00000569252 KRTAP19-5Q3LI72 72 aa5.95□□□□□ -1.46
USB1-215ENST00000569252 PMAIP1Q13794 54 aa5.94□□□□□ -1.46
USB1-215ENST00000569252 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
USB1-215ENST00000569252 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
USB1-215ENST00000569252 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
USB1-215ENST00000569252 MT1EP04732 61 aa5.88□□□□□ -1.47
USB1-215ENST00000569252 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
USB1-215ENST00000569252 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
USB1-215ENST00000569252 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
USB1-215ENST00000569252 MT1GP13640 62 aa5.71□□□□□ -1.5
USB1-215ENST00000569252 LCE5AQ5TCM9 118 aa5.69□□□□□ -1.5
USB1-215ENST00000569252 MT1LQ93083 61 aa5.69□□□□□ -1.5
USB1-215ENST00000569252 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
USB1-215ENST00000569252 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
USB1-215ENST00000569252 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
USB1-215ENST00000569252 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
USB1-215ENST00000569252 MT4P47944 62 aa5.59□□□□□ -1.51
USB1-215ENST00000569252 AHNAK2Q8IVF2 5795 aa5.58□□□□□ -1.52
USB1-215ENST00000569252 MT1MQ8N339 61 aa5.57□□□□□ -1.52
USB1-215ENST00000569252 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
USB1-215ENST00000569252 KTN1-AS1Q86SY8 53 aa5.49□□□□□ -1.53
USB1-215ENST00000569252 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
USB1-215ENST00000569252 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
USB1-215ENST00000569252 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
USB1-215ENST00000569252 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
USB1-215ENST00000569252 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
USB1-215ENST00000569252 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
USB1-215ENST00000569252 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
USB1-215ENST00000569252 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
USB1-215ENST00000569252 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
USB1-215ENST00000569252 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
USB1-215ENST00000569252 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
USB1-215ENST00000569252 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
USB1-215ENST00000569252 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
USB1-215ENST00000569252 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
USB1-215ENST00000569252 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
USB1-215ENST00000569252 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
USB1-215ENST00000569252 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
USB1-215ENST00000569252 MT1AP04731 61 aa4.86□□□□□ -1.63
USB1-215ENST00000569252 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
USB1-215ENST00000569252 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
USB1-215ENST00000569252 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
USB1-215ENST00000569252 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
USB1-215ENST00000569252 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
USB1-215ENST00000569252 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
USB1-215ENST00000569252 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
USB1-215ENST00000569252 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
USB1-215ENST00000569252 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
USB1-215ENST00000569252 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
USB1-215ENST00000569252 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
USB1-215ENST00000569252 MT3P25713 68 aa4.5□□□□□ -1.69
USB1-215ENST00000569252 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
USB1-215ENST00000569252 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
USB1-215ENST00000569252 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
USB1-215ENST00000569252 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
USB1-215ENST00000569252 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
USB1-215ENST00000569252 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
USB1-215ENST00000569252 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
USB1-215ENST00000569252 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
USB1-215ENST00000569252 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
USB1-215ENST00000569252 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
USB1-215ENST00000569252 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
USB1-215ENST00000569252 INE1O15225 51 aa3.5□□□□□ -1.85
USB1-215ENST00000569252 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
USB1-215ENST00000569252 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
USB1-215ENST00000569252 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
USB1-215ENST00000569252 PRM1P04553 51 aa3.15□□□□□ -1.91
USB1-215ENST00000569252 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
USB1-215ENST00000569252 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
USB1-215ENST00000569252 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
USB1-215ENST00000569252 H3BS24 57 aa2.88□□□□□ -1.95
USB1-215ENST00000569252 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
USB1-215ENST00000569252 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
USB1-215ENST00000569252 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 137.7 ms