RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	LAMA2	P24043	3122 aa	Known RBP	0.04	□□□□□ -2.4
UBR1-209	ENST00000569243	ATM	Q13315	3056 aa		0.03	□□□□□ -2.4
UBR1-209	ENST00000569243	CEP295	Q9C0D2	2601 aa		0.02	□□□□□ -2.41
UBR1-209	ENST00000569243	ITPR2	Q14571	2701 aa		0.02	□□□□□ -2.41
UBR1-209	ENST00000569243	CSMD2	Q7Z408	3487 aa		0.02	□□□□□ -2.41
UBR1-209	ENST00000569243		K7EIM0	57 aa		0.02	□□□□□ -2.41
UBR1-209	ENST00000569243	DEFB133	Q30KQ1	61 aa		0.02	□□□□□ -2.41
UBR1-209	ENST00000569243	NIPBL	Q6KC79	2804 aa	eCLIP	0.02	□□□□□ -2.41
UBR1-209	ENST00000569243	PRUNE2	Q8WUY3	3088 aa		0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	EPPK1	P58107	5090 aa	Known RBP	0.01	□□□□□ -2.41
UBR1-209	ENST00000569243		A0A096LPF7	62 aa		0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	KRTAP20-2	Q3LI61	65 aa		0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	KRTAP6-1	Q3LI64	71 aa		0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	TMEM167A	Q8TBQ9	72 aa		0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	HERC2	O95714	4834 aa		0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	BIRC6	Q9NR09	4857 aa		0	□□□□□ -2.41
UBR1-209	ENST00000569243	DST	Q03001	7570 aa	Known RBP	-0	□□□□□ -2.41
UBR1-209	ENST00000569243	MYO15A	Q9UKN7	3530 aa		-0	□□□□□ -2.41
UBR1-209	ENST00000569243	CENPE	Q02224	2701 aa		-0	□□□□□ -2.41
UBR1-209	ENST00000569243	RNF213	Q63HN8	5207 aa		-0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	MT1G	P13640	62 aa		-0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	MUC3A	Q02505	3323 aa		-0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	MKI67	P46013	3256 aa	Known RBP	-0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	DNAH12	Q6ZR08	3092 aa		-0.01	□□□□□ -2.41
UBR1-209	ENST00000569243	MT1H	P80294	61 aa		-0.02	□□□□□ -2.41
UBR1-209	ENST00000569243	WDFY4	Q6ZS81	3184 aa		-0.02	□□□□□ -2.41
UBR1-209	ENST00000569243	FRYL	O94915	3013 aa		-0.02	□□□□□ -2.41
UBR1-209	ENST00000569243	HYDIN	Q4G0P3	5121 aa		-0.02	□□□□□ -2.41
UBR1-209	ENST00000569243	XIRP2	A4UGR9	3374 aa		-0.02	□□□□□ -2.41
UBR1-209	ENST00000569243	EYS	Q5T1H1	3165 aa		-0.02	□□□□□ -2.41
UBR1-209	ENST00000569243		H3BUX3	64 aa		-0.03	□□□□□ -2.41
UBR1-209	ENST00000569243	LINC01556	Q5JQF7	62 aa		-0.03	□□□□□ -2.41
UBR1-209	ENST00000569243	RYR2	Q92736	4967 aa		-0.04	□□□□□ -2.42
UBR1-209	ENST00000569243	MT1E	P04732	61 aa		-0.04	□□□□□ -2.42
UBR1-209	ENST00000569243	HTN3	P15516	51 aa		-0.04	□□□□□ -2.42
UBR1-209	ENST00000569243	MT1X	P80297	61 aa		-0.04	□□□□□ -2.42
UBR1-209	ENST00000569243	DEFB124	Q8NES8	71 aa		-0.04	□□□□□ -2.42
UBR1-209	ENST00000569243	MT1L	Q93083	61 aa		-0.04	□□□□□ -2.42
UBR1-209	ENST00000569243	PCNT	O95613	3336 aa		-0.05	□□□□□ -2.42
UBR1-209	ENST00000569243	RYR3	Q15413	4870 aa		-0.05	□□□□□ -2.42
UBR1-209	ENST00000569243	STATH	P02808	62 aa		-0.05	□□□□□ -2.42
UBR1-209	ENST00000569243	CD52	P31358	61 aa		-0.05	□□□□□ -2.42
UBR1-209	ENST00000569243	MT4	P47944	62 aa		-0.05	□□□□□ -2.42
UBR1-209	ENST00000569243	USP34	Q70CQ2	3546 aa		-0.05	□□□□□ -2.42
UBR1-209	ENST00000569243	FREM2	Q5SZK8	3169 aa		-0.06	□□□□□ -2.42
UBR1-209	ENST00000569243	CEP350	Q5VT06	3117 aa		-0.06	□□□□□ -2.42
UBR1-209	ENST00000569243	BOD1L1	Q8NFC6	3051 aa		-0.06	□□□□□ -2.42
UBR1-209	ENST00000569243	DCHS1	Q96JQ0	3298 aa		-0.06	□□□□□ -2.42
UBR1-209	ENST00000569243	DEFB108B	Q8NET1	73 aa		-0.06	□□□□□ -2.42
UBR1-209	ENST00000569243	WDFY3	Q8IZQ1	3526 aa		-0.07	□□□□□ -2.42
UBR1-209	ENST00000569243	KIAA1109	Q2LD37	5005 aa		-0.08	□□□□□ -2.42
UBR1-209	ENST00000569243	RPS29	P62273	56 aa	Known RBP	-0.08	□□□□□ -2.42
UBR1-209	ENST00000569243	ASPM	Q8IZT6	3477 aa		-0.08	□□□□□ -2.42
UBR1-209	ENST00000569243	NEB	P20929	6669 aa		-0.08	□□□□□ -2.42
UBR1-209	ENST00000569243	MT1M	Q8N339	61 aa		-0.09	□□□□□ -2.42
UBR1-209	ENST00000569243	ABCA13	Q86UQ4	5058 aa		-0.1	□□□□□ -2.42
UBR1-209	ENST00000569243	MT2A	P02795	61 aa		-0.1	□□□□□ -2.43
UBR1-209	ENST00000569243	MT1HL1	P0DM35	61 aa		-0.11	□□□□□ -2.43
UBR1-209	ENST00000569243	LOC400499	M0QZD8	3231 aa		-0.11	□□□□□ -2.43
UBR1-209	ENST00000569243	CFAP47	Q6ZTR5	3102 aa		-0.12	□□□□□ -2.43
UBR1-209	ENST00000569243	EP400	Q96L91	3159 aa		-0.12	□□□□□ -2.43
UBR1-209	ENST00000569243	SPEG	Q15772	3267 aa		-0.12	□□□□□ -2.43
UBR1-209	ENST00000569243	UNC80	Q8N2C7	3258 aa		-0.12	□□□□□ -2.43
UBR1-209	ENST00000569243	DNAH14	Q0VDD8	3507 aa		-0.13	□□□□□ -2.43
UBR1-209	ENST00000569243	BRCA2	P51587	3418 aa		-0.15	□□□□□ -2.43
UBR1-209	ENST00000569243	MT1B	P07438	61 aa		-0.15	□□□□□ -2.43
UBR1-209	ENST00000569243	CENPF	P49454	3210 aa		-0.17	□□□□□ -2.44
UBR1-209	ENST00000569243	UTRN	P46939	3433 aa		-0.17	□□□□□ -2.44
UBR1-209	ENST00000569243	VCAN	P13611	3396 aa		-0.18	□□□□□ -2.44
UBR1-209	ENST00000569243	MT1F	P04733	61 aa		-0.18	□□□□□ -2.44
UBR1-209	ENST00000569243		Q9Y3F1	56 aa		-0.19	□□□□□ -2.44
UBR1-209	ENST00000569243	VPS13A	Q96RL7	3174 aa		-0.19	□□□□□ -2.44
UBR1-209	ENST00000569243	COX14	Q96I36	57 aa		-0.21	□□□□□ -2.44
UBR1-209	ENST00000569243	CDH23	Q9H251	3354 aa		-0.22	□□□□□ -2.44
UBR1-209	ENST00000569243	KRTAP19-2	Q3LHN2	52 aa		-0.24	□□□□□ -2.45
UBR1-209	ENST00000569243	GOLGB1	Q14789	3259 aa	Known RBP	-0.25	□□□□□ -2.45
UBR1-209	ENST00000569243	KRTAP20-1	Q3LI63	56 aa		-0.28	□□□□□ -2.45
UBR1-209	ENST00000569243	KRTAP19-6	Q3LI70	58 aa		-0.28	□□□□□ -2.45

Retrieved 78 of 20,778 RNA–protein pairs in 191 ms