RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 MT1XP80297 61 aa3.83□□□□□ -1.8
CAPN3-219ENST00000569136 SPATA8Q6RVD6 105 aa3.82□□□□□ -1.8
CAPN3-219ENST00000569136 A0A1B0GU69 56 aa3.77□□□□□ -1.81
CAPN3-219ENST00000569136 UQCR11O14957 56 aa3.77□□□□□ -1.81
CAPN3-219ENST00000569136 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
CAPN3-219ENST00000569136 NEBP20929 6669 aa3.77□□□□□ -1.81
CAPN3-219ENST00000569136 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
CAPN3-219ENST00000569136 A0A1B0GU33 70 aa3.72□□□□□ -1.81
CAPN3-219ENST00000569136 KRTAP13-4Q3LI77 160 aa3.71□□□□□ -1.82
CAPN3-219ENST00000569136 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
CAPN3-219ENST00000569136 KMT2DO14686 5537 aa3.7□□□□□ -1.82
CAPN3-219ENST00000569136 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
CAPN3-219ENST00000569136 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
CAPN3-219ENST00000569136 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
CAPN3-219ENST00000569136 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
CAPN3-219ENST00000569136 A0A0D9SG42 100 aa3.64□□□□□ -1.83
CAPN3-219ENST00000569136 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
CAPN3-219ENST00000569136 SPINT4Q6UDR6 99 aa3.61□□□□□ -1.83
CAPN3-219ENST00000569136 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
CAPN3-219ENST00000569136 SPRR2EP22531 72 aa3.58□□□□□ -1.84
CAPN3-219ENST00000569136 SPRR2BP35325 72 aa3.58□□□□□ -1.84
CAPN3-219ENST00000569136 SPRR2AP35326 72 aa3.58□□□□□ -1.84
CAPN3-219ENST00000569136 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
CAPN3-219ENST00000569136 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
CAPN3-219ENST00000569136 ROMO1P60602 79 aa3.57□□□□□ -1.84
CAPN3-219ENST00000569136 K7ERS5 55 aa3.56□□□□□ -1.84
CAPN3-219ENST00000569136 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
CAPN3-219ENST00000569136 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
CAPN3-219ENST00000569136 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
CAPN3-219ENST00000569136 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
CAPN3-219ENST00000569136 SPRR2DP22532 72 aa3.47□□□□□ -1.85
CAPN3-219ENST00000569136 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
CAPN3-219ENST00000569136 TNP1P09430 55 aa3.44□□□□□ -1.86
CAPN3-219ENST00000569136 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
CAPN3-219ENST00000569136 KRTAP19-7Q3SYF9 63 aa3.41□□□□□ -1.86
CAPN3-219ENST00000569136 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
CAPN3-219ENST00000569136 MT1EP04732 61 aa3.39□□□□□ -1.87
CAPN3-219ENST00000569136 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
CAPN3-219ENST00000569136 KRTAP19-3Q7Z4W3 81 aa3.36□□□□□ -1.87
CAPN3-219ENST00000569136 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
CAPN3-219ENST00000569136 MT1GP13640 62 aa3.34□□□□□ -1.87
CAPN3-219ENST00000569136 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
CAPN3-219ENST00000569136 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
CAPN3-219ENST00000569136 MT1LQ93083 61 aa3.25□□□□□ -1.89
CAPN3-219ENST00000569136 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
CAPN3-219ENST00000569136 MT1MQ8N339 61 aa3.22□□□□□ -1.89
CAPN3-219ENST00000569136 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
CAPN3-219ENST00000569136 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
CAPN3-219ENST00000569136 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
CAPN3-219ENST00000569136 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
CAPN3-219ENST00000569136 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
CAPN3-219ENST00000569136 MT4P47944 62 aa3□□□□□ -1.93
CAPN3-219ENST00000569136 LCE1CQ5T751 118 aa3□□□□□ -1.93
CAPN3-219ENST00000569136 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
CAPN3-219ENST00000569136 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
CAPN3-219ENST00000569136 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
CAPN3-219ENST00000569136 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
CAPN3-219ENST00000569136 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
CAPN3-219ENST00000569136 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
CAPN3-219ENST00000569136 INE1O15225 51 aa2.8□□□□□ -1.96
CAPN3-219ENST00000569136 MT1AP04731 61 aa2.78□□□□□ -1.96
CAPN3-219ENST00000569136 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
CAPN3-219ENST00000569136 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
CAPN3-219ENST00000569136 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
CAPN3-219ENST00000569136 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
CAPN3-219ENST00000569136 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
CAPN3-219ENST00000569136 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
CAPN3-219ENST00000569136 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
CAPN3-219ENST00000569136 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
CAPN3-219ENST00000569136 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
CAPN3-219ENST00000569136 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
CAPN3-219ENST00000569136 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
CAPN3-219ENST00000569136 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
CAPN3-219ENST00000569136 PRM1P04553 51 aa1.79□□□□□ -2.12
CAPN3-219ENST00000569136 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
CAPN3-219ENST00000569136 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
CAPN3-219ENST00000569136 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 65.5 ms