RNA–Protein interactions for RNA: ENST00000569074.1

CASC17-201, Transcript of cancer susceptibility 17, humanhuman

TSL 1 (best) BASIC

Gene CASC17, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC17-201ENST00000569074 PKHD1L1Q86WI1 4243 aa2.32□□□□□ -2.04
CASC17-201ENST00000569074 SMR3BP02814 79 aaPredicted RBP2.3□□□□□ -2.04
CASC17-201ENST00000569074 LRP1Q07954 4544 aaKnown RBP2.29□□□□□ -2.04
CASC17-201ENST00000569074 FAT1Q14517 4588 aa2.29□□□□□ -2.04
CASC17-201ENST00000569074 FSIP2Q5CZC0 6907 aa2.29□□□□□ -2.04
CASC17-201ENST00000569074 KRTAP10-4P60372 401 aaPredicted RBP2.28□□□□□ -2.04
CASC17-201ENST00000569074 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
CASC17-201ENST00000569074 TNP1P09430 55 aa2.26□□□□□ -2.05
CASC17-201ENST00000569074 TNXBP22105 4242 aa2.25□□□□□ -2.05
CASC17-201ENST00000569074 MT1HL1P0DM35 61 aa2.21□□□□□ -2.06
CASC17-201ENST00000569074 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.06
CASC17-201ENST00000569074 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
CASC17-201ENST00000569074 LPAP08519 4548 aa2.11□□□□□ -2.07
CASC17-201ENST00000569074 LRP2P98164 4655 aa2.11□□□□□ -2.07
CASC17-201ENST00000569074 KRTAP6-3Q3LI67 103 aa2.1□□□□□ -2.07
CASC17-201ENST00000569074 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
CASC17-201ENST00000569074 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
CASC17-201ENST00000569074 FLGP20930 4061 aaPredicted RBP2.06□□□□□ -2.08
CASC17-201ENST00000569074 KRTAP2-3P0C7H8 128 aa2.05□□□□□ -2.08
CASC17-201ENST00000569074 KRTAP2-4Q9BYR9 128 aa2.05□□□□□ -2.08
CASC17-201ENST00000569074 KRTAP10-10P60014 251 aa2.05□□□□□ -2.08
CASC17-201ENST00000569074 KRTAP8-1Q8IUC2 63 aa2.05□□□□□ -2.08
CASC17-201ENST00000569074 MACF1Q9UPN3 7388 aaKnown RBP2.03□□□□□ -2.08
CASC17-201ENST00000569074 USH2AO75445 5202 aa2.03□□□□□ -2.08
CASC17-201ENST00000569074 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
CASC17-201ENST00000569074 MUC17Q685J3 4493 aa2.01□□□□□ -2.09
CASC17-201ENST00000569074 KRTAP19-2Q3LHN2 52 aa2.01□□□□□ -2.09
CASC17-201ENST00000569074 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
CASC17-201ENST00000569074 KRTAP4-1Q9BYQ7 146 aa1.98□□□□□ -2.09
CASC17-201ENST00000569074 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
CASC17-201ENST00000569074 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
CASC17-201ENST00000569074 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
CASC17-201ENST00000569074 SPRR2GQ9BYE4 73 aa1.96□□□□□ -2.1
CASC17-201ENST00000569074 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
CASC17-201ENST00000569074 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
CASC17-201ENST00000569074 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
CASC17-201ENST00000569074 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
CASC17-201ENST00000569074 KRTAP2-1Q9BYU5 128 aa1.93□□□□□ -2.1
CASC17-201ENST00000569074 KMT2DO14686 5537 aa1.91□□□□□ -2.1
CASC17-201ENST00000569074 MT1HP80294 61 aa1.88□□□□□ -2.11
CASC17-201ENST00000569074 M0R2T5 61 aa1.86□□□□□ -2.11
CASC17-201ENST00000569074 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
CASC17-201ENST00000569074 MT1XP80297 61 aa1.83□□□□□ -2.12
CASC17-201ENST00000569074 KRTAP19-8Q3LI54 63 aa1.82□□□□□ -2.12
CASC17-201ENST00000569074 MUC12Q9UKN1 5478 aa1.81□□□□□ -2.12
CASC17-201ENST00000569074 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
CASC17-201ENST00000569074 MT1BP07438 61 aa1.77□□□□□ -2.13
CASC17-201ENST00000569074 MT1FP04733 61 aa1.76□□□□□ -2.13
CASC17-201ENST00000569074 MT2AP02795 61 aa1.75□□□□□ -2.13
CASC17-201ENST00000569074 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
CASC17-201ENST00000569074 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
CASC17-201ENST00000569074 KRTAP19-6Q3LI70 58 aa1.71□□□□□ -2.13
CASC17-201ENST00000569074 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
CASC17-201ENST00000569074 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
CASC17-201ENST00000569074 MT1LQ93083 61 aa1.61□□□□□ -2.15
CASC17-201ENST00000569074 DSTQ03001 7570 aaKnown RBP1.61□□□□□ -2.15
CASC17-201ENST00000569074 MT1EP04732 61 aa1.58□□□□□ -2.16
CASC17-201ENST00000569074 PRM1P04553 51 aa1.56□□□□□ -2.16
CASC17-201ENST00000569074 MT1AP04731 61 aa1.53□□□□□ -2.16
CASC17-201ENST00000569074 MT1GP13640 62 aa1.52□□□□□ -2.17
CASC17-201ENST00000569074 SPRR2EP22531 72 aa1.52□□□□□ -2.17
CASC17-201ENST00000569074 SPRR2BP35325 72 aa1.52□□□□□ -2.17
CASC17-201ENST00000569074 SPRR2AP35326 72 aa1.52□□□□□ -2.17
CASC17-201ENST00000569074 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
CASC17-201ENST00000569074 SPRR2DP22532 72 aa1.49□□□□□ -2.17
CASC17-201ENST00000569074 SPRR2FQ96RM1 72 aa1.47□□□□□ -2.17
CASC17-201ENST00000569074 MT1MQ8N339 61 aa1.44□□□□□ -2.18
CASC17-201ENST00000569074 KRTAP6-2Q3LI66 62 aa1.42□□□□□ -2.18
CASC17-201ENST00000569074 SYNE1Q8NF91 8797 aaKnown RBP1.4□□□□□ -2.18
CASC17-201ENST00000569074 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
CASC17-201ENST00000569074 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
CASC17-201ENST00000569074 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
CASC17-201ENST00000569074 MT4P47944 62 aa1.31□□□□□ -2.2
CASC17-201ENST00000569074 KRTAP20-2Q3LI61 65 aa1.16□□□□□ -2.22
CASC17-201ENST00000569074 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
CASC17-201ENST00000569074 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.25
CASC17-201ENST00000569074 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 243.5 ms