RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 MT1EP04732 61 aa5.09□□□□□ -1.59
CNOT1-215ENST00000569020 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
CNOT1-215ENST00000569020 A0A0D9SG42 100 aa5.07□□□□□ -1.6
CNOT1-215ENST00000569020 A0A1B0GU33 70 aa5.07□□□□□ -1.6
CNOT1-215ENST00000569020 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
CNOT1-215ENST00000569020 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
CNOT1-215ENST00000569020 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
CNOT1-215ENST00000569020 A0A1B0GU69 56 aa5□□□□□ -1.61
CNOT1-215ENST00000569020 PSPHP1O15172 72 aa5□□□□□ -1.61
CNOT1-215ENST00000569020 KRTAP12-1P59990 96 aa5□□□□□ -1.61
CNOT1-215ENST00000569020 SPINT4Q6UDR6 99 aa4.99□□□□□ -1.61
CNOT1-215ENST00000569020 MT1GP13640 62 aa4.98□□□□□ -1.61
CNOT1-215ENST00000569020 PRR15LQ9BU68 103 aa4.97□□□□□ -1.61
CNOT1-215ENST00000569020 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
CNOT1-215ENST00000569020 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
CNOT1-215ENST00000569020 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
CNOT1-215ENST00000569020 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
CNOT1-215ENST00000569020 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
CNOT1-215ENST00000569020 A8MU10 97 aa4.91□□□□□ -1.62
CNOT1-215ENST00000569020 A6NED7 52 aa4.89□□□□□ -1.63
CNOT1-215ENST00000569020 MT4P47944 62 aa4.87□□□□□ -1.63
CNOT1-215ENST00000569020 MT1MQ8N339 61 aa4.87□□□□□ -1.63
CNOT1-215ENST00000569020 CDC42SE1Q9NRR8 79 aa4.85□□□□□ -1.63
CNOT1-215ENST00000569020 MT1LQ93083 61 aa4.83□□□□□ -1.64
CNOT1-215ENST00000569020 PMAIP1Q13794 54 aa4.81□□□□□ -1.64
CNOT1-215ENST00000569020 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
CNOT1-215ENST00000569020 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
CNOT1-215ENST00000569020 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
CNOT1-215ENST00000569020 KRTAP5-4Q6L8H1 288 aa4.75□□□□□ -1.65
CNOT1-215ENST00000569020 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
CNOT1-215ENST00000569020 TNP1P09430 55 aa4.74□□□□□ -1.65
CNOT1-215ENST00000569020 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
CNOT1-215ENST00000569020 KRTAP5-11Q6L8G4 156 aa4.72□□□□□ -1.65
CNOT1-215ENST00000569020 UQCR11O14957 56 aa4.7□□□□□ -1.66
CNOT1-215ENST00000569020 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
CNOT1-215ENST00000569020 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
CNOT1-215ENST00000569020 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
CNOT1-215ENST00000569020 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
CNOT1-215ENST00000569020 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
CNOT1-215ENST00000569020 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
CNOT1-215ENST00000569020 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
CNOT1-215ENST00000569020 K7ERS5 55 aa4.48□□□□□ -1.69
CNOT1-215ENST00000569020 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
CNOT1-215ENST00000569020 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-215ENST00000569020 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
CNOT1-215ENST00000569020 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
CNOT1-215ENST00000569020 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
CNOT1-215ENST00000569020 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
CNOT1-215ENST00000569020 ROMO1P60602 79 aa4.28□□□□□ -1.72
CNOT1-215ENST00000569020 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
CNOT1-215ENST00000569020 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
CNOT1-215ENST00000569020 MT1AP04731 61 aa4.12□□□□□ -1.75
CNOT1-215ENST00000569020 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
CNOT1-215ENST00000569020 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
CNOT1-215ENST00000569020 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
CNOT1-215ENST00000569020 KRTAP5-8O75690 187 aa4.03□□□□□ -1.76
CNOT1-215ENST00000569020 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
CNOT1-215ENST00000569020 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
CNOT1-215ENST00000569020 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
CNOT1-215ENST00000569020 MT3P25713 68 aa3.91□□□□□ -1.78
CNOT1-215ENST00000569020 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
CNOT1-215ENST00000569020 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
CNOT1-215ENST00000569020 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
CNOT1-215ENST00000569020 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
CNOT1-215ENST00000569020 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
CNOT1-215ENST00000569020 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
CNOT1-215ENST00000569020 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
CNOT1-215ENST00000569020 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
CNOT1-215ENST00000569020 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
CNOT1-215ENST00000569020 INE1O15225 51 aa3.15□□□□□ -1.91
CNOT1-215ENST00000569020 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
CNOT1-215ENST00000569020 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
CNOT1-215ENST00000569020 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
CNOT1-215ENST00000569020 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
CNOT1-215ENST00000569020 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CNOT1-215ENST00000569020 PRM1P04553 51 aa2.23□□□□□ -2.05
CNOT1-215ENST00000569020 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
CNOT1-215ENST00000569020 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 86.8 ms