RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 MT4P47944 62 aa4.66□□□□□ -1.66
SNX29-207ENST00000568949 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
SNX29-207ENST00000568949 PRR15LQ9BU68 103 aa4.66□□□□□ -1.66
SNX29-207ENST00000568949 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
SNX29-207ENST00000568949 SMIM26A0A096LP01 95 aa4.6□□□□□ -1.67
SNX29-207ENST00000568949 PSPHP1O15172 72 aa4.6□□□□□ -1.67
SNX29-207ENST00000568949 KRTAP13-4Q3LI77 160 aa4.59□□□□□ -1.67
SNX29-207ENST00000568949 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
SNX29-207ENST00000568949 MT1GP13640 62 aa4.57□□□□□ -1.68
SNX29-207ENST00000568949 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
SNX29-207ENST00000568949 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
SNX29-207ENST00000568949 A0A0D9SG42 100 aa4.54□□□□□ -1.68
SNX29-207ENST00000568949 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
SNX29-207ENST00000568949 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
SNX29-207ENST00000568949 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
SNX29-207ENST00000568949 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
SNX29-207ENST00000568949 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
SNX29-207ENST00000568949 MT1MQ8N339 61 aa4.47□□□□□ -1.69
SNX29-207ENST00000568949 UQCR11O14957 56 aa4.46□□□□□ -1.7
SNX29-207ENST00000568949 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
SNX29-207ENST00000568949 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
SNX29-207ENST00000568949 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
SNX29-207ENST00000568949 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
SNX29-207ENST00000568949 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
SNX29-207ENST00000568949 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
SNX29-207ENST00000568949 MT1LQ93083 61 aa4.39□□□□□ -1.71
SNX29-207ENST00000568949 A8MU10 97 aa4.38□□□□□ -1.71
SNX29-207ENST00000568949 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
SNX29-207ENST00000568949 Q1T7F1 81 aa4.36□□□□□ -1.71
SNX29-207ENST00000568949 K7ERS5 55 aa4.35□□□□□ -1.71
SNX29-207ENST00000568949 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
SNX29-207ENST00000568949 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
SNX29-207ENST00000568949 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
SNX29-207ENST00000568949 TNP1P09430 55 aa4.31□□□□□ -1.72
SNX29-207ENST00000568949 RPS28P62857 69 aaKnown RBP4.3□□□□□ -1.72
SNX29-207ENST00000568949 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
SNX29-207ENST00000568949 A6NED7 52 aa4.21□□□□□ -1.74
SNX29-207ENST00000568949 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
SNX29-207ENST00000568949 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
SNX29-207ENST00000568949 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
SNX29-207ENST00000568949 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
SNX29-207ENST00000568949 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
SNX29-207ENST00000568949 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
SNX29-207ENST00000568949 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
SNX29-207ENST00000568949 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
SNX29-207ENST00000568949 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
SNX29-207ENST00000568949 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
SNX29-207ENST00000568949 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
SNX29-207ENST00000568949 ROMO1P60602 79 aa3.97□□□□□ -1.77
SNX29-207ENST00000568949 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
SNX29-207ENST00000568949 MUC5BQ9HC84 5762 aaPredicted RBP3.94□□□□□ -1.78
SNX29-207ENST00000568949 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
SNX29-207ENST00000568949 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
SNX29-207ENST00000568949 MT3P25713 68 aa3.86□□□□□ -1.79
SNX29-207ENST00000568949 BRK1Q8WUW1 75 aa3.85□□□□□ -1.79
SNX29-207ENST00000568949 MT1AP04731 61 aa3.74□□□□□ -1.81
SNX29-207ENST00000568949 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
SNX29-207ENST00000568949 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
SNX29-207ENST00000568949 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
SNX29-207ENST00000568949 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
SNX29-207ENST00000568949 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
SNX29-207ENST00000568949 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
SNX29-207ENST00000568949 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
SNX29-207ENST00000568949 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
SNX29-207ENST00000568949 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
SNX29-207ENST00000568949 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
SNX29-207ENST00000568949 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
SNX29-207ENST00000568949 INE1O15225 51 aa3.01□□□□□ -1.93
SNX29-207ENST00000568949 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
SNX29-207ENST00000568949 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
SNX29-207ENST00000568949 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
SNX29-207ENST00000568949 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
SNX29-207ENST00000568949 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
SNX29-207ENST00000568949 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
SNX29-207ENST00000568949 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
SNX29-207ENST00000568949 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
SNX29-207ENST00000568949 PRM1P04553 51 aa1.98□□□□□ -2.09
SNX29-207ENST00000568949 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms