RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-215ENST00000568903 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
TNRC6A-215ENST00000568903 ATP5EP56381 51 aaPredicted RBP3.8□□□□□ -1.8
TNRC6A-215ENST00000568903 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
TNRC6A-215ENST00000568903 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
TNRC6A-215ENST00000568903 TMEM258P61165 79 aa3.76□□□□□ -1.81
TNRC6A-215ENST00000568903 A0A1B0GU69 56 aa3.72□□□□□ -1.81
TNRC6A-215ENST00000568903 KRTAP13-4Q3LI77 160 aa3.7□□□□□ -1.82
TNRC6A-215ENST00000568903 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
TNRC6A-215ENST00000568903 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
TNRC6A-215ENST00000568903 A0A1B0GU33 70 aa3.69□□□□□ -1.82
TNRC6A-215ENST00000568903 MT1EP04732 61 aa3.66□□□□□ -1.82
TNRC6A-215ENST00000568903 A0A0D9SG42 100 aa3.64□□□□□ -1.83
TNRC6A-215ENST00000568903 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
TNRC6A-215ENST00000568903 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
TNRC6A-215ENST00000568903 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
TNRC6A-215ENST00000568903 LINC01558Q9Y6Z2 57 aa3.61□□□□□ -1.83
TNRC6A-215ENST00000568903 SMIM26A0A096LP01 95 aa3.6□□□□□ -1.83
TNRC6A-215ENST00000568903 SPINT4Q6UDR6 99 aa3.6□□□□□ -1.83
TNRC6A-215ENST00000568903 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
TNRC6A-215ENST00000568903 V9GYY9 64 aa3.58□□□□□ -1.84
TNRC6A-215ENST00000568903 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
TNRC6A-215ENST00000568903 MT4P47944 62 aa3.55□□□□□ -1.84
TNRC6A-215ENST00000568903 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
TNRC6A-215ENST00000568903 UQCR11O14957 56 aa3.54□□□□□ -1.84
TNRC6A-215ENST00000568903 PSPHP1O15172 72 aa3.51□□□□□ -1.85
TNRC6A-215ENST00000568903 MT1GP13640 62 aa3.51□□□□□ -1.85
TNRC6A-215ENST00000568903 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
TNRC6A-215ENST00000568903 Q1T7F1 81 aa3.5□□□□□ -1.85
TNRC6A-215ENST00000568903 MT1MQ8N339 61 aa3.5□□□□□ -1.85
TNRC6A-215ENST00000568903 KRTAP12-1P59990 96 aa3.48□□□□□ -1.85
TNRC6A-215ENST00000568903 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
TNRC6A-215ENST00000568903 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
TNRC6A-215ENST00000568903 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
TNRC6A-215ENST00000568903 MT1LQ93083 61 aa3.47□□□□□ -1.85
TNRC6A-215ENST00000568903 K7ERS5 55 aa3.46□□□□□ -1.86
TNRC6A-215ENST00000568903 A6NED7 52 aa3.43□□□□□ -1.86
TNRC6A-215ENST00000568903 PP632Q6XCG6 107 aa3.43□□□□□ -1.86
TNRC6A-215ENST00000568903 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
TNRC6A-215ENST00000568903 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
TNRC6A-215ENST00000568903 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
TNRC6A-215ENST00000568903 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
TNRC6A-215ENST00000568903 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
TNRC6A-215ENST00000568903 TNP1P09430 55 aa3.35□□□□□ -1.87
TNRC6A-215ENST00000568903 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
TNRC6A-215ENST00000568903 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
TNRC6A-215ENST00000568903 CDC42SE1Q9NRR8 79 aa3.26□□□□□ -1.89
TNRC6A-215ENST00000568903 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
TNRC6A-215ENST00000568903 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
TNRC6A-215ENST00000568903 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
TNRC6A-215ENST00000568903 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
TNRC6A-215ENST00000568903 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
TNRC6A-215ENST00000568903 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
TNRC6A-215ENST00000568903 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
TNRC6A-215ENST00000568903 PRO0628Q9UI54 55 aa3.19□□□□□ -1.9
TNRC6A-215ENST00000568903 ROMO1P60602 79 aa3.17□□□□□ -1.9
TNRC6A-215ENST00000568903 BRK1Q8WUW1 75 aa3.16□□□□□ -1.9
TNRC6A-215ENST00000568903 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
TNRC6A-215ENST00000568903 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
TNRC6A-215ENST00000568903 PMAIP1Q13794 54 aa2.99□□□□□ -1.93
TNRC6A-215ENST00000568903 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
TNRC6A-215ENST00000568903 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
TNRC6A-215ENST00000568903 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
TNRC6A-215ENST00000568903 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
TNRC6A-215ENST00000568903 MT1AP04731 61 aa2.92□□□□□ -1.94
TNRC6A-215ENST00000568903 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
TNRC6A-215ENST00000568903 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
TNRC6A-215ENST00000568903 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
TNRC6A-215ENST00000568903 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
TNRC6A-215ENST00000568903 KTN1-AS1Q86SY8 53 aa2.72□□□□□ -1.97
TNRC6A-215ENST00000568903 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
TNRC6A-215ENST00000568903 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
TNRC6A-215ENST00000568903 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
TNRC6A-215ENST00000568903 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
TNRC6A-215ENST00000568903 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
TNRC6A-215ENST00000568903 INE1O15225 51 aa1.71□□□□□ -2.14
TNRC6A-215ENST00000568903 PRM1P04553 51 aa1.63□□□□□ -2.15
TNRC6A-215ENST00000568903 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
TNRC6A-215ENST00000568903 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms