RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 ROMO1P60602 79 aa2.96□□□□□ -1.94
SCAPER-221ENST00000568549 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
SCAPER-221ENST00000568549 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
SCAPER-221ENST00000568549 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
SCAPER-221ENST00000568549 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
SCAPER-221ENST00000568549 SPRR2FQ96RM1 72 aa2.92□□□□□ -1.94
SCAPER-221ENST00000568549 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
SCAPER-221ENST00000568549 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
SCAPER-221ENST00000568549 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
SCAPER-221ENST00000568549 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
SCAPER-221ENST00000568549 PRO0628Q9UI54 55 aa2.86□□□□□ -1.95
SCAPER-221ENST00000568549 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
SCAPER-221ENST00000568549 KRTAP23-1A1A580 65 aa2.85□□□□□ -1.95
SCAPER-221ENST00000568549 MT1EP04732 61 aa2.83□□□□□ -1.96
SCAPER-221ENST00000568549 SPRR2EP22531 72 aa2.82□□□□□ -1.96
SCAPER-221ENST00000568549 SPRR2BP35325 72 aa2.82□□□□□ -1.96
SCAPER-221ENST00000568549 SPRR2AP35326 72 aa2.82□□□□□ -1.96
SCAPER-221ENST00000568549 NEBP20929 6669 aa2.81□□□□□ -1.96
SCAPER-221ENST00000568549 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
SCAPER-221ENST00000568549 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
SCAPER-221ENST00000568549 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
SCAPER-221ENST00000568549 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
SCAPER-221ENST00000568549 KRTAP15-1Q3LI76 137 aa2.79□□□□□ -1.96
SCAPER-221ENST00000568549 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SCAPER-221ENST00000568549 KRTAP19-3Q7Z4W3 81 aa2.76□□□□□ -1.97
SCAPER-221ENST00000568549 MT1LQ93083 61 aa2.74□□□□□ -1.97
SCAPER-221ENST00000568549 MT1GP13640 62 aa2.72□□□□□ -1.97
SCAPER-221ENST00000568549 SPRR2DP22532 72 aa2.72□□□□□ -1.97
SCAPER-221ENST00000568549 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
SCAPER-221ENST00000568549 PRAC1Q96KF2 57 aa2.7□□□□□ -1.98
SCAPER-221ENST00000568549 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
SCAPER-221ENST00000568549 MT1MQ8N339 61 aa2.68□□□□□ -1.98
SCAPER-221ENST00000568549 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
SCAPER-221ENST00000568549 KRTAP2-3P0C7H8 128 aa2.64□□□□□ -1.99
SCAPER-221ENST00000568549 KRTAP2-4Q9BYR9 128 aa2.64□□□□□ -1.99
SCAPER-221ENST00000568549 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
SCAPER-221ENST00000568549 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
SCAPER-221ENST00000568549 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
SCAPER-221ENST00000568549 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
SCAPER-221ENST00000568549 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
SCAPER-221ENST00000568549 SVIPQ8NHG7 77 aa2.55□□□□□ -2
SCAPER-221ENST00000568549 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
SCAPER-221ENST00000568549 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
SCAPER-221ENST00000568549 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
SCAPER-221ENST00000568549 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
SCAPER-221ENST00000568549 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
SCAPER-221ENST00000568549 MT4P47944 62 aa2.36□□□□□ -2.03
SCAPER-221ENST00000568549 MT1AP04731 61 aa2.34□□□□□ -2.03
SCAPER-221ENST00000568549 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
SCAPER-221ENST00000568549 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
SCAPER-221ENST00000568549 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
SCAPER-221ENST00000568549 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
SCAPER-221ENST00000568549 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
SCAPER-221ENST00000568549 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
SCAPER-221ENST00000568549 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
SCAPER-221ENST00000568549 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
SCAPER-221ENST00000568549 MT3P25713 68 aa2.13□□□□□ -2.07
SCAPER-221ENST00000568549 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
SCAPER-221ENST00000568549 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
SCAPER-221ENST00000568549 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
SCAPER-221ENST00000568549 NDUFAF8A1L188 74 aa2.04□□□□□ -2.08
SCAPER-221ENST00000568549 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
SCAPER-221ENST00000568549 LCE3DQ9BYE3 92 aa1.93□□□□□ -2.1
SCAPER-221ENST00000568549 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
SCAPER-221ENST00000568549 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
SCAPER-221ENST00000568549 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
SCAPER-221ENST00000568549 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
SCAPER-221ENST00000568549 A0A0A0MQY5 61 aa1.75□□□□□ -2.13
SCAPER-221ENST00000568549 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
SCAPER-221ENST00000568549 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
SCAPER-221ENST00000568549 INE1O15225 51 aa1.68□□□□□ -2.14
SCAPER-221ENST00000568549 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
SCAPER-221ENST00000568549 PRM1P04553 51 aa1.53□□□□□ -2.16
SCAPER-221ENST00000568549 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
SCAPER-221ENST00000568549 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
SCAPER-221ENST00000568549 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
SCAPER-221ENST00000568549 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
SCAPER-221ENST00000568549 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 8.9 ms