RNA–Protein interactions for RNA: ENST00000568316.1

RBBP6-211, Transcript of RB binding protein 6, ubiquitin ligase, human

TSL 5

Gene RBBP6, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP6-211	ENST00000568316	KRTAP2-1	Q9BYU5	128 aa		9.16	□□□□□ -0.94
RBBP6-211	ENST00000568316	ROMO1	P60602	79 aa		9.14	□□□□□ -0.95
RBBP6-211	ENST00000568316	SPRR2D	P22532	72 aa		9.01	□□□□□ -0.97
RBBP6-211	ENST00000568316	KRTAP19-3	Q7Z4W3	81 aa		8.98	□□□□□ -0.97
RBBP6-211	ENST00000568316	KRTAP12-3	P60328	96 aa		8.95	□□□□□ -0.98
RBBP6-211	ENST00000568316	LCE5A	Q5TCM9	118 aa		8.91	□□□□□ -0.98
RBBP6-211	ENST00000568316	KRTAP23-1	A1A580	65 aa		8.9	□□□□□ -0.98
RBBP6-211	ENST00000568316	MT1L	Q93083	61 aa		8.88	□□□□□ -0.99
RBBP6-211	ENST00000568316	MT1G	P13640	62 aa		8.81	□□□□□ -1
RBBP6-211	ENST00000568316	PP632	Q6XCG6	107 aa		8.74	□□□□□ -1.01
RBBP6-211	ENST00000568316	GPR98	Q8WXG9	6306 aa		8.74	□□□□□ -1.01
RBBP6-211	ENST00000568316	LCE3B	Q5TA77	95 aa		8.73	□□□□□ -1.01
RBBP6-211	ENST00000568316	MT1M	Q8N339	61 aa		8.7	□□□□□ -1.02
RBBP6-211	ENST00000568316	PMAIP1	Q13794	54 aa		8.67	□□□□□ -1.02
RBBP6-211	ENST00000568316	PRO0628	Q9UI54	55 aa		8.6	□□□□□ -1.03
RBBP6-211	ENST00000568316	KRTAP15-1	Q3LI76	137 aa		8.55	□□□□□ -1.04
RBBP6-211	ENST00000568316	KRTAP4-3	Q9BYR4	195 aa		8.53	□□□□□ -1.04
RBBP6-211	ENST00000568316	KRTAP4-7	Q9BYR0	210 aa		8.52	□□□□□ -1.05
RBBP6-211	ENST00000568316	DST	Q03001	7570 aa	Known RBP	8.43	□□□□□ -1.06
RBBP6-211	ENST00000568316	KRTAP19-4	Q3LI73	84 aa		8.36	□□□□□ -1.07
RBBP6-211	ENST00000568316	KRTAP4-9	Q9BYQ8	210 aa		8.32	□□□□□ -1.08
RBBP6-211	ENST00000568316	LCE3C	Q5T5A8	94 aa		8.29	□□□□□ -1.08
RBBP6-211	ENST00000568316	PRAC1	Q96KF2	57 aa		8.18	□□□□□ -1.1
RBBP6-211	ENST00000568316	KTN1-AS1	Q86SY8	53 aa		8.07	□□□□□ -1.12
RBBP6-211	ENST00000568316	LOC100996750	A0A140TA64	210 aa		8.04	□□□□□ -1.12
RBBP6-211	ENST00000568316	LCE1D	Q5T752	114 aa		8.03	□□□□□ -1.12
RBBP6-211	ENST00000568316	LCE4A	Q5TA78	99 aa		7.96	□□□□□ -1.14
RBBP6-211	ENST00000568316	HMCN1	Q96RW7	5635 aa		7.96	□□□□□ -1.14
RBBP6-211	ENST00000568316	KRTAP5-4	Q6L8H1	288 aa		7.92	□□□□□ -1.14
RBBP6-211	ENST00000568316	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.9	□□□□□ -1.14
RBBP6-211	ENST00000568316	AHNAK2	Q8IVF2	5795 aa		7.9	□□□□□ -1.15
RBBP6-211	ENST00000568316	MT4	P47944	62 aa		7.86	□□□□□ -1.15
RBBP6-211	ENST00000568316	KRTAP9-6	A8MVA2	160 aa		7.83	□□□□□ -1.16
RBBP6-211	ENST00000568316	KRTAP5-10	Q6L8G5	202 aa		7.8	□□□□□ -1.16
RBBP6-211	ENST00000568316	SVIP	Q8NHG7	77 aa		7.73	□□□□□ -1.17
RBBP6-211	ENST00000568316	KRTAP4-6	Q9BYQ5	205 aa		7.69	□□□□□ -1.18
RBBP6-211	ENST00000568316	KRTAP5-7	Q6L8G8	165 aa		7.59	□□□□□ -1.19
RBBP6-211	ENST00000568316	MT1A	P04731	61 aa		7.56	□□□□□ -1.2
RBBP6-211	ENST00000568316	KRTAP12-4	P60329	112 aa		7.56	□□□□□ -1.2
RBBP6-211	ENST00000568316	KRTAP6-1	Q3LI64	71 aa		7.49	□□□□□ -1.21
RBBP6-211	ENST00000568316	KRTAP20-2	Q3LI61	65 aa		7.46	□□□□□ -1.22
RBBP6-211	ENST00000568316	KRTAP5-3	Q6L8H2	238 aa		7.46	□□□□□ -1.22
RBBP6-211	ENST00000568316	SYNE1	Q8NF91	8797 aa	Known RBP	7.46	□□□□□ -1.22
RBBP6-211	ENST00000568316	SPRR5	A0A1B0GTR4	108 aa		7.45	□□□□□ -1.22
RBBP6-211	ENST00000568316	KRTAP9-4	Q9BYQ2	154 aa		7.23	□□□□□ -1.25
RBBP6-211	ENST00000568316	KRTAP6-2	Q3LI66	62 aa		7.05	□□□□□ -1.28
RBBP6-211	ENST00000568316	KRTAP5-2	Q701N4	177 aa		7.05	□□□□□ -1.28
RBBP6-211	ENST00000568316	LUZP6	Q538Z0	58 aa		6.97	□□□□□ -1.29
RBBP6-211	ENST00000568316	MT3	P25713	68 aa		6.87	□□□□□ -1.31
RBBP6-211	ENST00000568316	KRTAP4-11	Q9BYQ6	195 aa		6.72	□□□□□ -1.33
RBBP6-211	ENST00000568316	AHNAK	Q09666	5890 aa	Known RBP	6.67	□□□□□ -1.34
RBBP6-211	ENST00000568316	MUC5AC	P98088	5654 aa		6.65	□□□□□ -1.35
RBBP6-211	ENST00000568316	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.6	□□□□□ -1.35
RBBP6-211	ENST00000568316	KRTAP5-8	O75690	187 aa		6.52	□□□□□ -1.37
RBBP6-211	ENST00000568316	OBSCN	Q5VST9	7968 aa		6.41	□□□□□ -1.38
RBBP6-211	ENST00000568316	KRTAP9-9	Q9BYP9	154 aa		6.31	□□□□□ -1.4
RBBP6-211	ENST00000568316	KRTAP5-1	Q6L8H4	278 aa		6.22	□□□□□ -1.41
RBBP6-211	ENST00000568316	LCE1E	Q5T753	118 aa		6.14	□□□□□ -1.43
RBBP6-211	ENST00000568316	NDUFAF8	A1L188	74 aa		6.09	□□□□□ -1.43
RBBP6-211	ENST00000568316	LCE3D	Q9BYE3	92 aa		6.08	□□□□□ -1.44
RBBP6-211	ENST00000568316	LCE3E	Q5T5B0	92 aa		5.83	□□□□□ -1.48
RBBP6-211	ENST00000568316	LCE1B	Q5T7P3	118 aa		5.82	□□□□□ -1.48
RBBP6-211	ENST00000568316	KRTAP4-2	Q9BYR5	136 aa		5.79	□□□□□ -1.48
RBBP6-211	ENST00000568316	LCE1C	Q5T751	118 aa		5.7	□□□□□ -1.5
RBBP6-211	ENST00000568316		A0A0A0MQY5	61 aa		5.37	□□□□□ -1.55
RBBP6-211	ENST00000568316	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.25	□□□□□ -1.57
RBBP6-211	ENST00000568316	INE1	O15225	51 aa		5.14	□□□□□ -1.59
RBBP6-211	ENST00000568316	KRTAP5-11	Q6L8G4	156 aa		5.12	□□□□□ -1.59
RBBP6-211	ENST00000568316	KRTAP4-12	Q9BQ66	201 aa		5.08	□□□□□ -1.6
RBBP6-211	ENST00000568316	KRTAP21-2	Q3LI59	83 aa		4.91	□□□□□ -1.62
RBBP6-211	ENST00000568316	LCE1F	Q5T754	118 aa		4.81	□□□□□ -1.64
RBBP6-211	ENST00000568316	PRM1	P04553	51 aa		4.73	□□□□□ -1.65
RBBP6-211	ENST00000568316	PHGR1	C9JFL3	82 aa		4.59	□□□□□ -1.67
RBBP6-211	ENST00000568316	KRTAP4-4	Q9BYR3	166 aa		4.47	□□□□□ -1.69
RBBP6-211	ENST00000568316		H3BS24	57 aa		4.12	□□□□□ -1.75
RBBP6-211	ENST00000568316	MUC19	Q7Z5P9	8384 aa		3.93	□□□□□ -1.78
RBBP6-211	ENST00000568316	KRTAP21-1	Q3LI58	79 aa		3.49	□□□□□ -1.85
RBBP6-211	ENST00000568316	MUC16	Q8WXI7	14507 aa		2.78	□□□□□ -1.96

Retrieved 78 of 20,778 RNA–protein pairs in 5.4 ms