RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
GTF3C1-207ENST00000567806 MT1EP04732 61 aa7.01□□□□□ -1.29
GTF3C1-207ENST00000567806 TNP1P09430 55 aa6.93□□□□□ -1.3
GTF3C1-207ENST00000567806 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
GTF3C1-207ENST00000567806 MT1GP13640 62 aa6.85□□□□□ -1.31
GTF3C1-207ENST00000567806 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
GTF3C1-207ENST00000567806 LCE1DQ5T752 114 aa6.83□□□□□ -1.32
GTF3C1-207ENST00000567806 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
GTF3C1-207ENST00000567806 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
GTF3C1-207ENST00000567806 BRK1Q8WUW1 75 aa6.79□□□□□ -1.32
GTF3C1-207ENST00000567806 LCE4AQ5TA78 99 aa6.76□□□□□ -1.33
GTF3C1-207ENST00000567806 MT4P47944 62 aa6.73□□□□□ -1.33
GTF3C1-207ENST00000567806 ROMO1P60602 79 aa6.72□□□□□ -1.33
GTF3C1-207ENST00000567806 HMCN1Q96RW7 5635 aa6.7□□□□□ -1.34
GTF3C1-207ENST00000567806 MT1MQ8N339 61 aa6.7□□□□□ -1.34
GTF3C1-207ENST00000567806 MT1LQ93083 61 aa6.65□□□□□ -1.34
GTF3C1-207ENST00000567806 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
GTF3C1-207ENST00000567806 AHNAK2Q8IVF2 5795 aa6.57□□□□□ -1.36
GTF3C1-207ENST00000567806 KRTAP4-3Q9BYR4 195 aa6.56□□□□□ -1.36
GTF3C1-207ENST00000567806 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
GTF3C1-207ENST00000567806 KRTAP5-4Q6L8H1 288 aa6.54□□□□□ -1.36
GTF3C1-207ENST00000567806 KRTAP4-6Q9BYQ5 205 aa6.49□□□□□ -1.37
GTF3C1-207ENST00000567806 KRTAP5-10Q6L8G5 202 aa6.47□□□□□ -1.37
GTF3C1-207ENST00000567806 PMAIP1Q13794 54 aa6.46□□□□□ -1.38
GTF3C1-207ENST00000567806 PRO0628Q9UI54 55 aa6.45□□□□□ -1.38
GTF3C1-207ENST00000567806 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
GTF3C1-207ENST00000567806 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
GTF3C1-207ENST00000567806 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
GTF3C1-207ENST00000567806 KRTAP5-7Q6L8G8 165 aa6.27□□□□□ -1.41
GTF3C1-207ENST00000567806 KRTAP5-3Q6L8H2 238 aa6.27□□□□□ -1.41
GTF3C1-207ENST00000567806 KRTAP20-2Q3LI61 65 aa6.21□□□□□ -1.42
GTF3C1-207ENST00000567806 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
GTF3C1-207ENST00000567806 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
GTF3C1-207ENST00000567806 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
GTF3C1-207ENST00000567806 KRTAP5-5Q701N2 237 aaPredicted RBP6.14□□□□□ -1.43
GTF3C1-207ENST00000567806 KTN1-AS1Q86SY8 53 aa6.03□□□□□ -1.44
GTF3C1-207ENST00000567806 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
GTF3C1-207ENST00000567806 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
GTF3C1-207ENST00000567806 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
GTF3C1-207ENST00000567806 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
GTF3C1-207ENST00000567806 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
GTF3C1-207ENST00000567806 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
GTF3C1-207ENST00000567806 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
GTF3C1-207ENST00000567806 MT1AP04731 61 aa5.66□□□□□ -1.5
GTF3C1-207ENST00000567806 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.5
GTF3C1-207ENST00000567806 KRTAP5-8O75690 187 aa5.54□□□□□ -1.52
GTF3C1-207ENST00000567806 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
GTF3C1-207ENST00000567806 AHNAKQ09666 5890 aaKnown RBP5.5□□□□□ -1.53
GTF3C1-207ENST00000567806 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
GTF3C1-207ENST00000567806 MUC5ACP98088 5654 aa5.45□□□□□ -1.54
GTF3C1-207ENST00000567806 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
GTF3C1-207ENST00000567806 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
GTF3C1-207ENST00000567806 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
GTF3C1-207ENST00000567806 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
GTF3C1-207ENST00000567806 MT3P25713 68 aa5.23□□□□□ -1.57
GTF3C1-207ENST00000567806 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
GTF3C1-207ENST00000567806 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.59
GTF3C1-207ENST00000567806 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
GTF3C1-207ENST00000567806 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
GTF3C1-207ENST00000567806 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
GTF3C1-207ENST00000567806 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
GTF3C1-207ENST00000567806 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
GTF3C1-207ENST00000567806 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
GTF3C1-207ENST00000567806 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
GTF3C1-207ENST00000567806 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
GTF3C1-207ENST00000567806 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
GTF3C1-207ENST00000567806 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
GTF3C1-207ENST00000567806 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
GTF3C1-207ENST00000567806 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
GTF3C1-207ENST00000567806 INE1O15225 51 aa3.89□□□□□ -1.79
GTF3C1-207ENST00000567806 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
GTF3C1-207ENST00000567806 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
GTF3C1-207ENST00000567806 H3BS24 57 aa3.68□□□□□ -1.82
GTF3C1-207ENST00000567806 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
GTF3C1-207ENST00000567806 PRM1P04553 51 aa3.39□□□□□ -1.87
GTF3C1-207ENST00000567806 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
GTF3C1-207ENST00000567806 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
GTF3C1-207ENST00000567806 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms