RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 LCE3AQ5TA76 89 aa7.78□□□□□ -1.16
SPG7-214ENST00000566371 PP632Q6XCG6 107 aa7.74□□□□□ -1.17
SPG7-214ENST00000566371 MIR22HGQ0VDD5 57 aa7.73□□□□□ -1.17
SPG7-214ENST00000566371 DSTQ03001 7570 aaKnown RBP7.71□□□□□ -1.17
SPG7-214ENST00000566371 MT1LQ93083 61 aa7.7□□□□□ -1.18
SPG7-214ENST00000566371 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
SPG7-214ENST00000566371 MT1MQ8N339 61 aa7.65□□□□□ -1.18
SPG7-214ENST00000566371 BRK1Q8WUW1 75 aa7.61□□□□□ -1.19
SPG7-214ENST00000566371 K7ERS5 55 aa7.54□□□□□ -1.2
SPG7-214ENST00000566371 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
SPG7-214ENST00000566371 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
SPG7-214ENST00000566371 PRO0628Q9UI54 55 aa7.46□□□□□ -1.22
SPG7-214ENST00000566371 KRTAP4-9Q9BYQ8 210 aa7.45□□□□□ -1.22
SPG7-214ENST00000566371 KRTAP4-3Q9BYR4 195 aa7.42□□□□□ -1.22
SPG7-214ENST00000566371 LCE4AQ5TA78 99 aa7.37□□□□□ -1.23
SPG7-214ENST00000566371 LCE1DQ5T752 114 aa7.32□□□□□ -1.24
SPG7-214ENST00000566371 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
SPG7-214ENST00000566371 KRTAP5-4Q6L8H1 288 aa7.26□□□□□ -1.25
SPG7-214ENST00000566371 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
SPG7-214ENST00000566371 MT4P47944 62 aa7.23□□□□□ -1.25
SPG7-214ENST00000566371 PMAIP1Q13794 54 aa7.23□□□□□ -1.25
SPG7-214ENST00000566371 HMCN1Q96RW7 5635 aa7.23□□□□□ -1.25
SPG7-214ENST00000566371 GPR98Q8WXG9 6306 aa7.18□□□□□ -1.26
SPG7-214ENST00000566371 KRTAP19-4Q3LI73 84 aa7.17□□□□□ -1.26
SPG7-214ENST00000566371 ROMO1P60602 79 aa7.1□□□□□ -1.27
SPG7-214ENST00000566371 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
SPG7-214ENST00000566371 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
SPG7-214ENST00000566371 KRTAP5-5Q701N2 237 aaPredicted RBP7.03□□□□□ -1.28
SPG7-214ENST00000566371 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
SPG7-214ENST00000566371 KTN1-AS1Q86SY8 53 aa6.91□□□□□ -1.3
SPG7-214ENST00000566371 LOC100996750A0A140TA64 210 aa6.9□□□□□ -1.3
SPG7-214ENST00000566371 AHNAK2Q8IVF2 5795 aa6.89□□□□□ -1.31
SPG7-214ENST00000566371 SPRR5A0A1B0GTR4 108 aa6.85□□□□□ -1.31
SPG7-214ENST00000566371 KRTAP20-2Q3LI61 65 aa6.83□□□□□ -1.32
SPG7-214ENST00000566371 KRTAP12-4P60329 112 aa6.82□□□□□ -1.32
SPG7-214ENST00000566371 KRTAP5-10Q6L8G5 202 aa6.78□□□□□ -1.32
SPG7-214ENST00000566371 PRAC1Q96KF2 57 aa6.68□□□□□ -1.34
SPG7-214ENST00000566371 KRTAP5-3Q6L8H2 238 aa6.63□□□□□ -1.35
SPG7-214ENST00000566371 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
SPG7-214ENST00000566371 MT1AP04731 61 aa6.56□□□□□ -1.36
SPG7-214ENST00000566371 SVIPQ8NHG7 77 aa6.55□□□□□ -1.36
SPG7-214ENST00000566371 KRTAP9-6A8MVA2 160 aa6.52□□□□□ -1.37
SPG7-214ENST00000566371 KRTAP5-7Q6L8G8 165 aa6.51□□□□□ -1.37
SPG7-214ENST00000566371 KRTAP6-1Q3LI64 71 aa6.5□□□□□ -1.37
SPG7-214ENST00000566371 KRTAP5-2Q701N4 177 aa6.39□□□□□ -1.39
SPG7-214ENST00000566371 KRTAP9-4Q9BYQ2 154 aa6.33□□□□□ -1.4
SPG7-214ENST00000566371 KRTAP4-11Q9BYQ6 195 aa6.22□□□□□ -1.41
SPG7-214ENST00000566371 KRTAP6-2Q3LI66 62 aa6.2□□□□□ -1.42
SPG7-214ENST00000566371 KRTAP5-8O75690 187 aa6.01□□□□□ -1.45
SPG7-214ENST00000566371 MT3P25713 68 aa6□□□□□ -1.45
SPG7-214ENST00000566371 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
SPG7-214ENST00000566371 KRTAP5-1Q6L8H4 278 aa5.69□□□□□ -1.5
SPG7-214ENST00000566371 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
SPG7-214ENST00000566371 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
SPG7-214ENST00000566371 MUC5BQ9HC84 5762 aaPredicted RBP5.68□□□□□ -1.5
SPG7-214ENST00000566371 AHNAKQ09666 5890 aaKnown RBP5.64□□□□□ -1.51
SPG7-214ENST00000566371 LUZP6Q538Z0 58 aa5.59□□□□□ -1.51
SPG7-214ENST00000566371 LCE1EQ5T753 118 aa5.52□□□□□ -1.53
SPG7-214ENST00000566371 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
SPG7-214ENST00000566371 KRTAP4-2Q9BYR5 136 aa5.17□□□□□ -1.58
SPG7-214ENST00000566371 LCE1CQ5T751 118 aa5.12□□□□□ -1.59
SPG7-214ENST00000566371 LCE1BQ5T7P3 118 aa5.12□□□□□ -1.59
SPG7-214ENST00000566371 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
SPG7-214ENST00000566371 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
SPG7-214ENST00000566371 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
SPG7-214ENST00000566371 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
SPG7-214ENST00000566371 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
SPG7-214ENST00000566371 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
SPG7-214ENST00000566371 INE1O15225 51 aa4.49□□□□□ -1.69
SPG7-214ENST00000566371 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
SPG7-214ENST00000566371 H3BS24 57 aa4.4□□□□□ -1.71
SPG7-214ENST00000566371 KRTAP21-2Q3LI59 83 aa4.3□□□□□ -1.72
SPG7-214ENST00000566371 PHGR1C9JFL3 82 aa3.99□□□□□ -1.77
SPG7-214ENST00000566371 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
SPG7-214ENST00000566371 PRM1P04553 51 aa3.64□□□□□ -1.83
SPG7-214ENST00000566371 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
SPG7-214ENST00000566371 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
SPG7-214ENST00000566371 MUC16Q8WXI7 14507 aa2.62□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 117.6 ms