RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
TSR3-202ENST00000566296 MT1EP04732 61 aa6.18□□□□□ -1.42
TSR3-202ENST00000566296 C10orf95Q9H7T3 257 aa6.12□□□□□ -1.43
TSR3-202ENST00000566296 TNP1P09430 55 aa6.06□□□□□ -1.44
TSR3-202ENST00000566296 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
TSR3-202ENST00000566296 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
TSR3-202ENST00000566296 MT1GP13640 62 aa6.01□□□□□ -1.45
TSR3-202ENST00000566296 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
TSR3-202ENST00000566296 KRTAP19-5Q3LI72 72 aa5.98□□□□□ -1.45
TSR3-202ENST00000566296 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
TSR3-202ENST00000566296 MT4P47944 62 aa5.95□□□□□ -1.46
TSR3-202ENST00000566296 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
TSR3-202ENST00000566296 HMCN1Q96RW7 5635 aa5.95□□□□□ -1.46
TSR3-202ENST00000566296 ROMO1P60602 79 aa5.93□□□□□ -1.46
TSR3-202ENST00000566296 MT1MQ8N339 61 aa5.9□□□□□ -1.46
TSR3-202ENST00000566296 AHNAK2Q8IVF2 5795 aa5.87□□□□□ -1.47
TSR3-202ENST00000566296 MT1LQ93083 61 aa5.85□□□□□ -1.47
TSR3-202ENST00000566296 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
TSR3-202ENST00000566296 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
TSR3-202ENST00000566296 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
TSR3-202ENST00000566296 KRTAP5-10Q6L8G5 202 aa5.75□□□□□ -1.49
TSR3-202ENST00000566296 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
TSR3-202ENST00000566296 KRTAP4-6Q9BYQ5 205 aa5.71□□□□□ -1.5
TSR3-202ENST00000566296 PMAIP1Q13794 54 aa5.7□□□□□ -1.5
TSR3-202ENST00000566296 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
TSR3-202ENST00000566296 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
TSR3-202ENST00000566296 KRTAP5-7Q6L8G8 165 aa5.57□□□□□ -1.52
TSR3-202ENST00000566296 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
TSR3-202ENST00000566296 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
TSR3-202ENST00000566296 KRTAP20-2Q3LI61 65 aa5.49□□□□□ -1.53
TSR3-202ENST00000566296 SPRR5A0A1B0GTR4 108 aa5.44□□□□□ -1.54
TSR3-202ENST00000566296 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
TSR3-202ENST00000566296 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
TSR3-202ENST00000566296 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
TSR3-202ENST00000566296 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
TSR3-202ENST00000566296 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
TSR3-202ENST00000566296 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
TSR3-202ENST00000566296 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
TSR3-202ENST00000566296 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
TSR3-202ENST00000566296 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
TSR3-202ENST00000566296 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
TSR3-202ENST00000566296 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
TSR3-202ENST00000566296 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
TSR3-202ENST00000566296 MT1AP04731 61 aa4.99□□□□□ -1.61
TSR3-202ENST00000566296 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
TSR3-202ENST00000566296 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
TSR3-202ENST00000566296 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
TSR3-202ENST00000566296 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
TSR3-202ENST00000566296 MUC5BQ9HC84 5762 aaPredicted RBP4.86□□□□□ -1.63
TSR3-202ENST00000566296 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
TSR3-202ENST00000566296 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
TSR3-202ENST00000566296 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
TSR3-202ENST00000566296 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
TSR3-202ENST00000566296 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
TSR3-202ENST00000566296 MT3P25713 68 aa4.58□□□□□ -1.68
TSR3-202ENST00000566296 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
TSR3-202ENST00000566296 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
TSR3-202ENST00000566296 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
TSR3-202ENST00000566296 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
TSR3-202ENST00000566296 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
TSR3-202ENST00000566296 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
TSR3-202ENST00000566296 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
TSR3-202ENST00000566296 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
TSR3-202ENST00000566296 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
TSR3-202ENST00000566296 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
TSR3-202ENST00000566296 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
TSR3-202ENST00000566296 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
TSR3-202ENST00000566296 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
TSR3-202ENST00000566296 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
TSR3-202ENST00000566296 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
TSR3-202ENST00000566296 INE1O15225 51 aa3.37□□□□□ -1.87
TSR3-202ENST00000566296 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
TSR3-202ENST00000566296 PRM1P04553 51 aa3.05□□□□□ -1.92
TSR3-202ENST00000566296 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
TSR3-202ENST00000566296 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.93
TSR3-202ENST00000566296 H3BS24 57 aa2.8□□□□□ -1.96
TSR3-202ENST00000566296 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
TSR3-202ENST00000566296 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms