RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 KRTAP10-12P60413 245 aa6.61□□□□□ -1.35
RAB40C-210ENST00000566290 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
RAB40C-210ENST00000566290 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
RAB40C-210ENST00000566290 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
RAB40C-210ENST00000566290 LCE1AQ5T7P2 110 aa6.54□□□□□ -1.36
RAB40C-210ENST00000566290 SPRR2DP22532 72 aa6.5□□□□□ -1.37
RAB40C-210ENST00000566290 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
RAB40C-210ENST00000566290 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
RAB40C-210ENST00000566290 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
RAB40C-210ENST00000566290 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
RAB40C-210ENST00000566290 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
RAB40C-210ENST00000566290 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
RAB40C-210ENST00000566290 DSTQ03001 7570 aaKnown RBP6.28□□□□□ -1.4
RAB40C-210ENST00000566290 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
RAB40C-210ENST00000566290 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
RAB40C-210ENST00000566290 KRTAP4-9Q9BYQ8 210 aa6.21□□□□□ -1.42
RAB40C-210ENST00000566290 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
RAB40C-210ENST00000566290 LUZP6Q538Z0 58 aa6.05□□□□□ -1.44
RAB40C-210ENST00000566290 MT1EP04732 61 aa6.04□□□□□ -1.44
RAB40C-210ENST00000566290 HMCN1Q96RW7 5635 aa5.97□□□□□ -1.45
RAB40C-210ENST00000566290 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
RAB40C-210ENST00000566290 NDUFAF8A1L188 74 aa5.95□□□□□ -1.46
RAB40C-210ENST00000566290 MT1LQ93083 61 aa5.95□□□□□ -1.46
RAB40C-210ENST00000566290 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
RAB40C-210ENST00000566290 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
RAB40C-210ENST00000566290 KRTAP5-10Q6L8G5 202 aa5.9□□□□□ -1.46
RAB40C-210ENST00000566290 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
RAB40C-210ENST00000566290 MT4P47944 62 aa5.79□□□□□ -1.48
RAB40C-210ENST00000566290 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
RAB40C-210ENST00000566290 MT1GP13640 62 aa5.78□□□□□ -1.48
RAB40C-210ENST00000566290 KRTAP5-7Q6L8G8 165 aa5.75□□□□□ -1.49
RAB40C-210ENST00000566290 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
RAB40C-210ENST00000566290 MT1MQ8N339 61 aa5.67□□□□□ -1.5
RAB40C-210ENST00000566290 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
RAB40C-210ENST00000566290 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
RAB40C-210ENST00000566290 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
RAB40C-210ENST00000566290 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
RAB40C-210ENST00000566290 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
RAB40C-210ENST00000566290 H3BS24 57 aa5.49□□□□□ -1.53
RAB40C-210ENST00000566290 KRTAP5-4Q6L8H1 288 aa5.46□□□□□ -1.54
RAB40C-210ENST00000566290 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
RAB40C-210ENST00000566290 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
RAB40C-210ENST00000566290 KRTAP20-2Q3LI61 65 aa5.21□□□□□ -1.58
RAB40C-210ENST00000566290 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
RAB40C-210ENST00000566290 INE1O15225 51 aa5.1□□□□□ -1.59
RAB40C-210ENST00000566290 MT1AP04731 61 aa5.1□□□□□ -1.59
RAB40C-210ENST00000566290 AHNAKQ09666 5890 aaKnown RBP5.1□□□□□ -1.59
RAB40C-210ENST00000566290 MUC5ACP98088 5654 aa5.03□□□□□ -1.6
RAB40C-210ENST00000566290 MUC5BQ9HC84 5762 aaPredicted RBP5□□□□□ -1.61
RAB40C-210ENST00000566290 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
RAB40C-210ENST00000566290 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
RAB40C-210ENST00000566290 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
RAB40C-210ENST00000566290 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
RAB40C-210ENST00000566290 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
RAB40C-210ENST00000566290 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
RAB40C-210ENST00000566290 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
RAB40C-210ENST00000566290 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
RAB40C-210ENST00000566290 MT3P25713 68 aa4.6□□□□□ -1.67
RAB40C-210ENST00000566290 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
RAB40C-210ENST00000566290 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
RAB40C-210ENST00000566290 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
RAB40C-210ENST00000566290 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
RAB40C-210ENST00000566290 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
RAB40C-210ENST00000566290 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
RAB40C-210ENST00000566290 PRM1P04553 51 aa3.86□□□□□ -1.79
RAB40C-210ENST00000566290 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
RAB40C-210ENST00000566290 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
RAB40C-210ENST00000566290 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
RAB40C-210ENST00000566290 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
RAB40C-210ENST00000566290 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
RAB40C-210ENST00000566290 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
RAB40C-210ENST00000566290 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
RAB40C-210ENST00000566290 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
RAB40C-210ENST00000566290 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
RAB40C-210ENST00000566290 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
RAB40C-210ENST00000566290 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
RAB40C-210ENST00000566290 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
RAB40C-210ENST00000566290 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 604.6 ms