RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
TRADD-205ENST00000566247 LCE5AQ5TCM9 118 aa6.6□□□□□ -1.35
TRADD-205ENST00000566247 MT1GP13640 62 aa6.49□□□□□ -1.37
TRADD-205ENST00000566247 PP632Q6XCG6 107 aa6.48□□□□□ -1.37
TRADD-205ENST00000566247 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
TRADD-205ENST00000566247 MT1LQ93083 61 aa6.46□□□□□ -1.38
TRADD-205ENST00000566247 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
TRADD-205ENST00000566247 DSTQ03001 7570 aaKnown RBP6.41□□□□□ -1.38
TRADD-205ENST00000566247 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
TRADD-205ENST00000566247 MT1MQ8N339 61 aa6.39□□□□□ -1.39
TRADD-205ENST00000566247 BRK1Q8WUW1 75 aa6.26□□□□□ -1.41
TRADD-205ENST00000566247 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
TRADD-205ENST00000566247 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
TRADD-205ENST00000566247 ROMO1P60602 79 aa6.2□□□□□ -1.42
TRADD-205ENST00000566247 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
TRADD-205ENST00000566247 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
TRADD-205ENST00000566247 LCE4AQ5TA78 99 aa6.06□□□□□ -1.44
TRADD-205ENST00000566247 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
TRADD-205ENST00000566247 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
TRADD-205ENST00000566247 LCE1DQ5T752 114 aa6□□□□□ -1.45
TRADD-205ENST00000566247 MT4P47944 62 aa5.99□□□□□ -1.45
TRADD-205ENST00000566247 KRTAP5-4Q6L8H1 288 aa5.94□□□□□ -1.46
TRADD-205ENST00000566247 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
TRADD-205ENST00000566247 PRO0628Q9UI54 55 aa5.92□□□□□ -1.46
TRADD-205ENST00000566247 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
TRADD-205ENST00000566247 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
TRADD-205ENST00000566247 GPR98Q8WXG9 6306 aa5.82□□□□□ -1.48
TRADD-205ENST00000566247 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
TRADD-205ENST00000566247 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
TRADD-205ENST00000566247 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
TRADD-205ENST00000566247 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
TRADD-205ENST00000566247 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
TRADD-205ENST00000566247 SPRR5A0A1B0GTR4 108 aa5.61□□□□□ -1.51
TRADD-205ENST00000566247 AHNAK2Q8IVF2 5795 aa5.6□□□□□ -1.51
TRADD-205ENST00000566247 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
TRADD-205ENST00000566247 KTN1-AS1Q86SY8 53 aa5.53□□□□□ -1.52
TRADD-205ENST00000566247 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
TRADD-205ENST00000566247 MT1AP04731 61 aa5.5□□□□□ -1.53
TRADD-205ENST00000566247 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
TRADD-205ENST00000566247 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
TRADD-205ENST00000566247 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
TRADD-205ENST00000566247 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
TRADD-205ENST00000566247 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
TRADD-205ENST00000566247 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
TRADD-205ENST00000566247 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
TRADD-205ENST00000566247 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
TRADD-205ENST00000566247 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
TRADD-205ENST00000566247 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
TRADD-205ENST00000566247 MT3P25713 68 aa5.04□□□□□ -1.6
TRADD-205ENST00000566247 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
TRADD-205ENST00000566247 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
TRADD-205ENST00000566247 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
TRADD-205ENST00000566247 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
TRADD-205ENST00000566247 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
TRADD-205ENST00000566247 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
TRADD-205ENST00000566247 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
TRADD-205ENST00000566247 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
TRADD-205ENST00000566247 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
TRADD-205ENST00000566247 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
TRADD-205ENST00000566247 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
TRADD-205ENST00000566247 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
TRADD-205ENST00000566247 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
TRADD-205ENST00000566247 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
TRADD-205ENST00000566247 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
TRADD-205ENST00000566247 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
TRADD-205ENST00000566247 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
TRADD-205ENST00000566247 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
TRADD-205ENST00000566247 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
TRADD-205ENST00000566247 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
TRADD-205ENST00000566247 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
TRADD-205ENST00000566247 INE1O15225 51 aa3.53□□□□□ -1.84
TRADD-205ENST00000566247 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
TRADD-205ENST00000566247 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
TRADD-205ENST00000566247 PRM1P04553 51 aa3.18□□□□□ -1.9
TRADD-205ENST00000566247 H3BS24 57 aa2.99□□□□□ -1.93
TRADD-205ENST00000566247 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
TRADD-205ENST00000566247 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
TRADD-205ENST00000566247 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 122.5 ms