RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PLAC4Q8WY50 150 aa2.64□□□□□ -1.99
CHD9-217ENST00000565832 KRTAP19-8Q3LI54 63 aa2.63□□□□□ -1.99
CHD9-217ENST00000565832 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
CHD9-217ENST00000565832 KMT2DO14686 5537 aa2.59□□□□□ -1.99
CHD9-217ENST00000565832 KRTAP25-1Q3LHN0 102 aa2.58□□□□□ -2
CHD9-217ENST00000565832 SSPOA2VEC9 5147 aa2.58□□□□□ -2
CHD9-217ENST00000565832 KRTAP10-5P60370 271 aa2.57□□□□□ -2
CHD9-217ENST00000565832 MT1XP80297 61 aa2.57□□□□□ -2
CHD9-217ENST00000565832 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
CHD9-217ENST00000565832 KRTAP10-7P60409 375 aaPredicted RBP2.53□□□□□ -2
CHD9-217ENST00000565832 TNP1P09430 55 aa2.51□□□□□ -2.01
CHD9-217ENST00000565832 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
CHD9-217ENST00000565832 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
CHD9-217ENST00000565832 PRO2289Q9P1D8 64 aa2.46□□□□□ -2.02
CHD9-217ENST00000565832 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
CHD9-217ENST00000565832 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
CHD9-217ENST00000565832 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
CHD9-217ENST00000565832 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
CHD9-217ENST00000565832 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
CHD9-217ENST00000565832 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
CHD9-217ENST00000565832 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.02
CHD9-217ENST00000565832 PP632Q6XCG6 107 aa2.4□□□□□ -2.02
CHD9-217ENST00000565832 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
CHD9-217ENST00000565832 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
CHD9-217ENST00000565832 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
CHD9-217ENST00000565832 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
CHD9-217ENST00000565832 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.03
CHD9-217ENST00000565832 MUC12Q9UKN1 5478 aa2.34□□□□□ -2.03
CHD9-217ENST00000565832 KRTAP12-3P60328 96 aa2.34□□□□□ -2.04
CHD9-217ENST00000565832 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
CHD9-217ENST00000565832 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
CHD9-217ENST00000565832 KRTAP19-7Q3SYF9 63 aa2.3□□□□□ -2.04
CHD9-217ENST00000565832 CRCT1Q9UGL9 99 aa2.29□□□□□ -2.04
CHD9-217ENST00000565832 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
CHD9-217ENST00000565832 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
CHD9-217ENST00000565832 MT1EP04732 61 aa2.23□□□□□ -2.05
CHD9-217ENST00000565832 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
CHD9-217ENST00000565832 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
CHD9-217ENST00000565832 MT1LQ93083 61 aa2.19□□□□□ -2.06
CHD9-217ENST00000565832 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
CHD9-217ENST00000565832 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
CHD9-217ENST00000565832 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
CHD9-217ENST00000565832 MT1MQ8N339 61 aa2.1□□□□□ -2.07
CHD9-217ENST00000565832 MT1GP13640 62 aa2.09□□□□□ -2.07
CHD9-217ENST00000565832 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
CHD9-217ENST00000565832 SPRR2EP22531 72 aa2.05□□□□□ -2.08
CHD9-217ENST00000565832 SPRR2BP35325 72 aa2.05□□□□□ -2.08
CHD9-217ENST00000565832 SPRR2AP35326 72 aa2.05□□□□□ -2.08
CHD9-217ENST00000565832 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
CHD9-217ENST00000565832 NEBP20929 6669 aa1.98□□□□□ -2.09
CHD9-217ENST00000565832 SPRR2DP22532 72 aa1.96□□□□□ -2.1
CHD9-217ENST00000565832 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
CHD9-217ENST00000565832 OBSCNQ5VST9 7968 aa1.91□□□□□ -2.1
CHD9-217ENST00000565832 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
CHD9-217ENST00000565832 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
CHD9-217ENST00000565832 KRTAP2-1Q9BYU5 128 aa1.91□□□□□ -2.1
CHD9-217ENST00000565832 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
CHD9-217ENST00000565832 MT1AP04731 61 aa1.83□□□□□ -2.12
CHD9-217ENST00000565832 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
CHD9-217ENST00000565832 MT4P47944 62 aa1.76□□□□□ -2.13
CHD9-217ENST00000565832 KRTAP20-1Q3LI63 56 aa1.74□□□□□ -2.13
CHD9-217ENST00000565832 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
CHD9-217ENST00000565832 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
CHD9-217ENST00000565832 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
CHD9-217ENST00000565832 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
CHD9-217ENST00000565832 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
CHD9-217ENST00000565832 INE1O15225 51 aa1.68□□□□□ -2.14
CHD9-217ENST00000565832 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
CHD9-217ENST00000565832 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
CHD9-217ENST00000565832 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
CHD9-217ENST00000565832 PRM1P04553 51 aa1.44□□□□□ -2.18
CHD9-217ENST00000565832 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
CHD9-217ENST00000565832 KRTAP5-10Q6L8G5 202 aa1.37□□□□□ -2.19
CHD9-217ENST00000565832 MUC19Q7Z5P9 8384 aa1.32□□□□□ -2.2
CHD9-217ENST00000565832 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
CHD9-217ENST00000565832 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
CHD9-217ENST00000565832 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
CHD9-217ENST00000565832 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 43.1 ms