RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 KRTAP13-4Q3LI77 160 aa2.47□□□□□ -2.01
TCF4-228ENST00000565393 A0A0D9SG42 100 aa2.45□□□□□ -2.02
TCF4-228ENST00000565393 K7ERS5 55 aa2.45□□□□□ -2.02
TCF4-228ENST00000565393 SPINT4Q6UDR6 99 aa2.45□□□□□ -2.02
TCF4-228ENST00000565393 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
TCF4-228ENST00000565393 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
TCF4-228ENST00000565393 A0A1B0GU33 70 aa2.41□□□□□ -2.02
TCF4-228ENST00000565393 KRTAP19-7Q3SYF9 63 aa2.39□□□□□ -2.03
TCF4-228ENST00000565393 LCE5AQ5TCM9 118 aa2.38□□□□□ -2.03
TCF4-228ENST00000565393 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
TCF4-228ENST00000565393 MT1EP04732 61 aa2.37□□□□□ -2.03
TCF4-228ENST00000565393 KRTAP4-9Q9BYQ8 210 aa2.36□□□□□ -2.03
TCF4-228ENST00000565393 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
TCF4-228ENST00000565393 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
TCF4-228ENST00000565393 MT1GP13640 62 aa2.33□□□□□ -2.04
TCF4-228ENST00000565393 KRTAP15-1Q3LI76 137 aa2.33□□□□□ -2.04
TCF4-228ENST00000565393 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
TCF4-228ENST00000565393 DSTQ03001 7570 aaKnown RBP2.3□□□□□ -2.04
TCF4-228ENST00000565393 TNP1P09430 55 aa2.29□□□□□ -2.04
TCF4-228ENST00000565393 MT4P47944 62 aa2.27□□□□□ -2.05
TCF4-228ENST00000565393 LCE1DQ5T752 114 aa2.27□□□□□ -2.05
TCF4-228ENST00000565393 MT1MQ8N339 61 aa2.27□□□□□ -2.05
TCF4-228ENST00000565393 MT1LQ93083 61 aa2.27□□□□□ -2.05
TCF4-228ENST00000565393 C10orf95Q9H7T3 257 aa2.27□□□□□ -2.05
TCF4-228ENST00000565393 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
TCF4-228ENST00000565393 LCE4AQ5TA78 99 aa2.26□□□□□ -2.05
TCF4-228ENST00000565393 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
TCF4-228ENST00000565393 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
TCF4-228ENST00000565393 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
TCF4-228ENST00000565393 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
TCF4-228ENST00000565393 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
TCF4-228ENST00000565393 KRTAP4-6Q9BYQ5 205 aa2.18□□□□□ -2.06
TCF4-228ENST00000565393 KRTAP4-7Q9BYR0 210 aa2.18□□□□□ -2.06
TCF4-228ENST00000565393 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
TCF4-228ENST00000565393 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
TCF4-228ENST00000565393 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
TCF4-228ENST00000565393 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
TCF4-228ENST00000565393 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
TCF4-228ENST00000565393 KRTAP5-3Q6L8H2 238 aa2.07□□□□□ -2.08
TCF4-228ENST00000565393 LOC100996750A0A140TA64 210 aa2.06□□□□□ -2.08
TCF4-228ENST00000565393 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
TCF4-228ENST00000565393 KRTAP19-4Q3LI73 84 aa2.04□□□□□ -2.08
TCF4-228ENST00000565393 KRTAP23-1A1A580 65 aa2.01□□□□□ -2.09
TCF4-228ENST00000565393 LCE3CQ5T5A8 94 aa2.01□□□□□ -2.09
TCF4-228ENST00000565393 INE1O15225 51 aa1.98□□□□□ -2.09
TCF4-228ENST00000565393 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
TCF4-228ENST00000565393 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
TCF4-228ENST00000565393 MT1AP04731 61 aa1.92□□□□□ -2.1
TCF4-228ENST00000565393 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
TCF4-228ENST00000565393 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
TCF4-228ENST00000565393 KRTAP9-4Q9BYQ2 154 aa1.89□□□□□ -2.11
TCF4-228ENST00000565393 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
TCF4-228ENST00000565393 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
TCF4-228ENST00000565393 KRTAP9-6A8MVA2 160 aa1.86□□□□□ -2.11
TCF4-228ENST00000565393 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
TCF4-228ENST00000565393 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
TCF4-228ENST00000565393 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
TCF4-228ENST00000565393 MT3P25713 68 aa1.8□□□□□ -2.12
TCF4-228ENST00000565393 KRTAP9-9Q9BYP9 154 aa1.79□□□□□ -2.12
TCF4-228ENST00000565393 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
TCF4-228ENST00000565393 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
TCF4-228ENST00000565393 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
TCF4-228ENST00000565393 LCE1BQ5T7P3 118 aa1.6□□□□□ -2.15
TCF4-228ENST00000565393 KRTAP4-2Q9BYR5 136 aa1.53□□□□□ -2.16
TCF4-228ENST00000565393 LCE1CQ5T751 118 aa1.52□□□□□ -2.17
TCF4-228ENST00000565393 KRTAP4-12Q9BQ66 201 aa1.46□□□□□ -2.18
TCF4-228ENST00000565393 LCE3DQ9BYE3 92 aa1.45□□□□□ -2.18
TCF4-228ENST00000565393 LCE3EQ5T5B0 92 aa1.36□□□□□ -2.19
TCF4-228ENST00000565393 LCE1FQ5T754 118 aa1.35□□□□□ -2.19
TCF4-228ENST00000565393 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
TCF4-228ENST00000565393 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.33□□□□□ -2.2
TCF4-228ENST00000565393 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
TCF4-228ENST00000565393 PRM1P04553 51 aa1.25□□□□□ -2.21
TCF4-228ENST00000565393 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
TCF4-228ENST00000565393 KRTAP4-4Q9BYR3 166 aa1.2□□□□□ -2.22
TCF4-228ENST00000565393 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
TCF4-228ENST00000565393 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
TCF4-228ENST00000565393 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 26.6 ms