RNA–Protein interactions for RNA: ENST00000565351.5

KIFC3-220, Transcript of kinesin family member C3, humanhuman

TSL 1 (best)

Gene KIFC3, Length 297 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-220ENST00000565351 CRCT1Q9UGL9 99 aa4.81□□□□□ -1.64
KIFC3-220ENST00000565351 SVIPQ8NHG7 77 aa4.8□□□□□ -1.64
KIFC3-220ENST00000565351 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
KIFC3-220ENST00000565351 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.66
KIFC3-220ENST00000565351 KMT2DO14686 5537 aa4.68□□□□□ -1.66
KIFC3-220ENST00000565351 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
KIFC3-220ENST00000565351 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
KIFC3-220ENST00000565351 KRTAP19-7Q3SYF9 63 aa4.55□□□□□ -1.68
KIFC3-220ENST00000565351 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
KIFC3-220ENST00000565351 MT1EP04732 61 aa4.47□□□□□ -1.69
KIFC3-220ENST00000565351 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
KIFC3-220ENST00000565351 KRTAP5-9P26371 169 aa4.46□□□□□ -1.7
KIFC3-220ENST00000565351 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
KIFC3-220ENST00000565351 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
KIFC3-220ENST00000565351 MT1LQ93083 61 aa4.37□□□□□ -1.71
KIFC3-220ENST00000565351 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
KIFC3-220ENST00000565351 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
KIFC3-220ENST00000565351 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
KIFC3-220ENST00000565351 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
KIFC3-220ENST00000565351 MT1GP13640 62 aa4.3□□□□□ -1.72
KIFC3-220ENST00000565351 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
KIFC3-220ENST00000565351 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
KIFC3-220ENST00000565351 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
KIFC3-220ENST00000565351 MT1MQ8N339 61 aa4.2□□□□□ -1.74
KIFC3-220ENST00000565351 SPRR2EP22531 72 aa4.16□□□□□ -1.74
KIFC3-220ENST00000565351 SPRR2BP35325 72 aa4.16□□□□□ -1.74
KIFC3-220ENST00000565351 SPRR2AP35326 72 aa4.16□□□□□ -1.74
KIFC3-220ENST00000565351 NEBP20929 6669 aa4.05□□□□□ -1.76
KIFC3-220ENST00000565351 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
KIFC3-220ENST00000565351 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
KIFC3-220ENST00000565351 SPRR2DP22532 72 aa4.02□□□□□ -1.77
KIFC3-220ENST00000565351 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
KIFC3-220ENST00000565351 DSTQ03001 7570 aaKnown RBP3.94□□□□□ -1.78
KIFC3-220ENST00000565351 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
KIFC3-220ENST00000565351 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
KIFC3-220ENST00000565351 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
KIFC3-220ENST00000565351 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
KIFC3-220ENST00000565351 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
KIFC3-220ENST00000565351 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
KIFC3-220ENST00000565351 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
KIFC3-220ENST00000565351 MT1AP04731 61 aa3.73□□□□□ -1.81
KIFC3-220ENST00000565351 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
KIFC3-220ENST00000565351 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
KIFC3-220ENST00000565351 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
KIFC3-220ENST00000565351 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
KIFC3-220ENST00000565351 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
KIFC3-220ENST00000565351 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
KIFC3-220ENST00000565351 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
KIFC3-220ENST00000565351 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
KIFC3-220ENST00000565351 MT4P47944 62 aa3.44□□□□□ -1.86
KIFC3-220ENST00000565351 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
KIFC3-220ENST00000565351 MT3P25713 68 aa3.38□□□□□ -1.87
KIFC3-220ENST00000565351 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
KIFC3-220ENST00000565351 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
KIFC3-220ENST00000565351 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
KIFC3-220ENST00000565351 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
KIFC3-220ENST00000565351 INE1O15225 51 aa3.24□□□□□ -1.89
KIFC3-220ENST00000565351 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
KIFC3-220ENST00000565351 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
KIFC3-220ENST00000565351 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
KIFC3-220ENST00000565351 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
KIFC3-220ENST00000565351 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
KIFC3-220ENST00000565351 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
KIFC3-220ENST00000565351 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
KIFC3-220ENST00000565351 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
KIFC3-220ENST00000565351 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
KIFC3-220ENST00000565351 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
KIFC3-220ENST00000565351 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
KIFC3-220ENST00000565351 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
KIFC3-220ENST00000565351 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
KIFC3-220ENST00000565351 PRM1P04553 51 aa2.63□□□□□ -1.99
KIFC3-220ENST00000565351 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
KIFC3-220ENST00000565351 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
KIFC3-220ENST00000565351 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
KIFC3-220ENST00000565351 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
KIFC3-220ENST00000565351 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
KIFC3-220ENST00000565351 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
KIFC3-220ENST00000565351 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms