RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
NME3-207ENST00000564628 DSTQ03001 7570 aaKnown RBP7.22□□□□□ -1.25
NME3-207ENST00000564628 TNP1P09430 55 aa7.21□□□□□ -1.26
NME3-207ENST00000564628 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
NME3-207ENST00000564628 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
NME3-207ENST00000564628 LCE5AQ5TCM9 118 aa7.11□□□□□ -1.27
NME3-207ENST00000564628 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
NME3-207ENST00000564628 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
NME3-207ENST00000564628 KTN1-AS1Q86SY8 53 aa7.02□□□□□ -1.29
NME3-207ENST00000564628 MT1EP04732 61 aa7□□□□□ -1.29
NME3-207ENST00000564628 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
NME3-207ENST00000564628 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
NME3-207ENST00000564628 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
NME3-207ENST00000564628 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
NME3-207ENST00000564628 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
NME3-207ENST00000564628 PRAC1Q96KF2 57 aa6.85□□□□□ -1.31
NME3-207ENST00000564628 HMCN1Q96RW7 5635 aa6.84□□□□□ -1.31
NME3-207ENST00000564628 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
NME3-207ENST00000564628 MT1GP13640 62 aa6.82□□□□□ -1.32
NME3-207ENST00000564628 MT4P47944 62 aa6.78□□□□□ -1.32
NME3-207ENST00000564628 MT1LQ93083 61 aa6.73□□□□□ -1.33
NME3-207ENST00000564628 AHNAK2Q8IVF2 5795 aa6.72□□□□□ -1.33
NME3-207ENST00000564628 MT1MQ8N339 61 aa6.68□□□□□ -1.34
NME3-207ENST00000564628 KRTAP5-10Q6L8G5 202 aa6.67□□□□□ -1.34
NME3-207ENST00000564628 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.34
NME3-207ENST00000564628 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
NME3-207ENST00000564628 SVIPQ8NHG7 77 aa6.62□□□□□ -1.35
NME3-207ENST00000564628 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
NME3-207ENST00000564628 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
NME3-207ENST00000564628 KRTAP5-7Q6L8G8 165 aa6.48□□□□□ -1.37
NME3-207ENST00000564628 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
NME3-207ENST00000564628 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
NME3-207ENST00000564628 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
NME3-207ENST00000564628 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
NME3-207ENST00000564628 KRTAP20-2Q3LI61 65 aa6.28□□□□□ -1.4
NME3-207ENST00000564628 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
NME3-207ENST00000564628 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
NME3-207ENST00000564628 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
NME3-207ENST00000564628 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
NME3-207ENST00000564628 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
NME3-207ENST00000564628 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
NME3-207ENST00000564628 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
NME3-207ENST00000564628 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
NME3-207ENST00000564628 LUZP6Q538Z0 58 aa5.79□□□□□ -1.48
NME3-207ENST00000564628 KRTAP5-2Q701N4 177 aa5.75□□□□□ -1.49
NME3-207ENST00000564628 MT1AP04731 61 aa5.73□□□□□ -1.49
NME3-207ENST00000564628 AHNAKQ09666 5890 aaKnown RBP5.69□□□□□ -1.5
NME3-207ENST00000564628 MUC5ACP98088 5654 aa5.67□□□□□ -1.5
NME3-207ENST00000564628 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
NME3-207ENST00000564628 KRTAP5-8O75690 187 aa5.65□□□□□ -1.5
NME3-207ENST00000564628 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
NME3-207ENST00000564628 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
NME3-207ENST00000564628 H3BS24 57 aa5.44□□□□□ -1.54
NME3-207ENST00000564628 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
NME3-207ENST00000564628 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
NME3-207ENST00000564628 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.54
NME3-207ENST00000564628 NDUFAF8A1L188 74 aa5.39□□□□□ -1.55
NME3-207ENST00000564628 KRTAP5-1Q6L8H4 278 aa5.22□□□□□ -1.57
NME3-207ENST00000564628 MT3P25713 68 aa5.2□□□□□ -1.58
NME3-207ENST00000564628 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
NME3-207ENST00000564628 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
NME3-207ENST00000564628 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
NME3-207ENST00000564628 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
NME3-207ENST00000564628 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
NME3-207ENST00000564628 INE1O15225 51 aa4.55□□□□□ -1.68
NME3-207ENST00000564628 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
NME3-207ENST00000564628 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
NME3-207ENST00000564628 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
NME3-207ENST00000564628 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
NME3-207ENST00000564628 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
NME3-207ENST00000564628 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
NME3-207ENST00000564628 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
NME3-207ENST00000564628 PRM1P04553 51 aa3.77□□□□□ -1.81
NME3-207ENST00000564628 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
NME3-207ENST00000564628 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
NME3-207ENST00000564628 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
NME3-207ENST00000564628 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
NME3-207ENST00000564628 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 7.4 ms