RNA–Protein interactions for RNA: ENST00000564105.5

CTU2-204, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 1 (best)

Gene CTU2, Length 1,586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-204ENST00000564105 KTN1-AS1Q86SY8 53 aa7.15□□□□□ -1.27
CTU2-204ENST00000564105 KRTAP19-5Q3LI72 72 aa7.14□□□□□ -1.27
CTU2-204ENST00000564105 LCE1AQ5T7P2 110 aa7.14□□□□□ -1.27
CTU2-204ENST00000564105 KRTAP19-7Q3SYF9 63 aa7.13□□□□□ -1.27
CTU2-204ENST00000564105 PP632Q6XCG6 107 aa7.1□□□□□ -1.27
CTU2-204ENST00000564105 MT1EP04732 61 aa7.03□□□□□ -1.28
CTU2-204ENST00000564105 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
CTU2-204ENST00000564105 SPRR2DP22532 72 aa6.98□□□□□ -1.29
CTU2-204ENST00000564105 KRTAP2-2Q9BYT5 123 aa6.98□□□□□ -1.29
CTU2-204ENST00000564105 KRTAP2-1Q9BYU5 128 aa6.98□□□□□ -1.29
CTU2-204ENST00000564105 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
CTU2-204ENST00000564105 KRTAP19-3Q7Z4W3 81 aa6.85□□□□□ -1.31
CTU2-204ENST00000564105 MT1LQ93083 61 aa6.84□□□□□ -1.31
CTU2-204ENST00000564105 LCE3BQ5TA77 95 aa6.81□□□□□ -1.32
CTU2-204ENST00000564105 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
CTU2-204ENST00000564105 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
CTU2-204ENST00000564105 MT1GP13640 62 aa6.76□□□□□ -1.33
CTU2-204ENST00000564105 MT1MQ8N339 61 aa6.66□□□□□ -1.34
CTU2-204ENST00000564105 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
CTU2-204ENST00000564105 DSTQ03001 7570 aaKnown RBP6.6□□□□□ -1.35
CTU2-204ENST00000564105 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
CTU2-204ENST00000564105 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
CTU2-204ENST00000564105 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
CTU2-204ENST00000564105 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.38
CTU2-204ENST00000564105 GPR98Q8WXG9 6306 aa6.36□□□□□ -1.39
CTU2-204ENST00000564105 LCE1DQ5T752 114 aa6.23□□□□□ -1.41
CTU2-204ENST00000564105 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
CTU2-204ENST00000564105 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
CTU2-204ENST00000564105 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.42
CTU2-204ENST00000564105 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
CTU2-204ENST00000564105 MT4P47944 62 aa6.14□□□□□ -1.43
CTU2-204ENST00000564105 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
CTU2-204ENST00000564105 KRTAP5-4Q6L8H1 288 aa6.06□□□□□ -1.44
CTU2-204ENST00000564105 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
CTU2-204ENST00000564105 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
CTU2-204ENST00000564105 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
CTU2-204ENST00000564105 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
CTU2-204ENST00000564105 MT1AP04731 61 aa5.83□□□□□ -1.48
CTU2-204ENST00000564105 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
CTU2-204ENST00000564105 H3BS24 57 aa5.77□□□□□ -1.49
CTU2-204ENST00000564105 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
CTU2-204ENST00000564105 LUZP6Q538Z0 58 aa5.73□□□□□ -1.49
CTU2-204ENST00000564105 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
CTU2-204ENST00000564105 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
CTU2-204ENST00000564105 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
CTU2-204ENST00000564105 KRTAP5-7Q6L8G8 165 aa5.64□□□□□ -1.51
CTU2-204ENST00000564105 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
CTU2-204ENST00000564105 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
CTU2-204ENST00000564105 KRTAP6-2Q3LI66 62 aa5.38□□□□□ -1.55
CTU2-204ENST00000564105 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
CTU2-204ENST00000564105 MT3P25713 68 aa5.3□□□□□ -1.56
CTU2-204ENST00000564105 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
CTU2-204ENST00000564105 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
CTU2-204ENST00000564105 KRTAP5-8O75690 187 aa5.09□□□□□ -1.59
CTU2-204ENST00000564105 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.6
CTU2-204ENST00000564105 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
CTU2-204ENST00000564105 MUC5ACP98088 5654 aa4.93□□□□□ -1.62
CTU2-204ENST00000564105 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
CTU2-204ENST00000564105 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
CTU2-204ENST00000564105 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
CTU2-204ENST00000564105 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
CTU2-204ENST00000564105 INE1O15225 51 aa4.77□□□□□ -1.65
CTU2-204ENST00000564105 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
CTU2-204ENST00000564105 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
CTU2-204ENST00000564105 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
CTU2-204ENST00000564105 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
CTU2-204ENST00000564105 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
CTU2-204ENST00000564105 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
CTU2-204ENST00000564105 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
CTU2-204ENST00000564105 PRM1P04553 51 aa3.89□□□□□ -1.79
CTU2-204ENST00000564105 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
CTU2-204ENST00000564105 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
CTU2-204ENST00000564105 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
CTU2-204ENST00000564105 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
CTU2-204ENST00000564105 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
CTU2-204ENST00000564105 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
CTU2-204ENST00000564105 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
CTU2-204ENST00000564105 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 135.7 ms