RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 A0A1B0GU69 56 aa6.87□□□□□ -1.31
NME3-204ENST00000563498 UQCR11O14957 56 aa6.87□□□□□ -1.31
NME3-204ENST00000563498 HMCN1Q96RW7 5635 aa6.84□□□□□ -1.31
NME3-204ENST00000563498 MIR22HGQ0VDD5 57 aa6.84□□□□□ -1.31
NME3-204ENST00000563498 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
NME3-204ENST00000563498 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
NME3-204ENST00000563498 MT1GP13640 62 aa6.82□□□□□ -1.32
NME3-204ENST00000563498 MT4P47944 62 aa6.78□□□□□ -1.32
NME3-204ENST00000563498 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
NME3-204ENST00000563498 AHNAK2Q8IVF2 5795 aa6.72□□□□□ -1.33
NME3-204ENST00000563498 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
NME3-204ENST00000563498 A0A0D9SG42 100 aa6.71□□□□□ -1.34
NME3-204ENST00000563498 MT1MQ8N339 61 aa6.68□□□□□ -1.34
NME3-204ENST00000563498 KRTAP5-10Q6L8G5 202 aa6.67□□□□□ -1.34
NME3-204ENST00000563498 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.34
NME3-204ENST00000563498 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
NME3-204ENST00000563498 MT1LQ93083 61 aa6.6□□□□□ -1.35
NME3-204ENST00000563498 ROMO1P60602 79 aa6.56□□□□□ -1.36
NME3-204ENST00000563498 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
NME3-204ENST00000563498 SPINT4Q6UDR6 99 aa6.5□□□□□ -1.37
NME3-204ENST00000563498 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
NME3-204ENST00000563498 KRTAP5-7Q6L8G8 165 aa6.48□□□□□ -1.37
NME3-204ENST00000563498 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
NME3-204ENST00000563498 K7ERS5 55 aa6.42□□□□□ -1.38
NME3-204ENST00000563498 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
NME3-204ENST00000563498 A0A1B0GU33 70 aa6.39□□□□□ -1.39
NME3-204ENST00000563498 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
NME3-204ENST00000563498 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
NME3-204ENST00000563498 KRTAP20-2Q3LI61 65 aa6.28□□□□□ -1.4
NME3-204ENST00000563498 TNP1P09430 55 aa6.27□□□□□ -1.41
NME3-204ENST00000563498 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
NME3-204ENST00000563498 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
NME3-204ENST00000563498 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
NME3-204ENST00000563498 KRTAP12-3P60328 96 aa6.13□□□□□ -1.43
NME3-204ENST00000563498 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
NME3-204ENST00000563498 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
NME3-204ENST00000563498 NDUFAF8A1L188 74 aa6.01□□□□□ -1.45
NME3-204ENST00000563498 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
NME3-204ENST00000563498 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
NME3-204ENST00000563498 A0A0A0MQY5 61 aa5.9□□□□□ -1.46
NME3-204ENST00000563498 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
NME3-204ENST00000563498 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
NME3-204ENST00000563498 KRTAP5-2Q701N4 177 aa5.75□□□□□ -1.49
NME3-204ENST00000563498 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
NME3-204ENST00000563498 AHNAKQ09666 5890 aaKnown RBP5.69□□□□□ -1.5
NME3-204ENST00000563498 MUC5ACP98088 5654 aa5.67□□□□□ -1.5
NME3-204ENST00000563498 KRTAP5-8O75690 187 aa5.65□□□□□ -1.5
NME3-204ENST00000563498 MT1AP04731 61 aa5.62□□□□□ -1.51
NME3-204ENST00000563498 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
NME3-204ENST00000563498 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
NME3-204ENST00000563498 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
NME3-204ENST00000563498 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
NME3-204ENST00000563498 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
NME3-204ENST00000563498 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
NME3-204ENST00000563498 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
NME3-204ENST00000563498 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.54
NME3-204ENST00000563498 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
NME3-204ENST00000563498 KRTAP5-1Q6L8H4 278 aa5.22□□□□□ -1.57
NME3-204ENST00000563498 MT3P25713 68 aa5.17□□□□□ -1.58
NME3-204ENST00000563498 INE1O15225 51 aa5.13□□□□□ -1.59
NME3-204ENST00000563498 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
NME3-204ENST00000563498 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
NME3-204ENST00000563498 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
NME3-204ENST00000563498 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
NME3-204ENST00000563498 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
NME3-204ENST00000563498 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
NME3-204ENST00000563498 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
NME3-204ENST00000563498 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
NME3-204ENST00000563498 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
NME3-204ENST00000563498 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
NME3-204ENST00000563498 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
NME3-204ENST00000563498 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
NME3-204ENST00000563498 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
NME3-204ENST00000563498 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
NME3-204ENST00000563498 PRM1P04553 51 aa3.31□□□□□ -1.88
NME3-204ENST00000563498 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
NME3-204ENST00000563498 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 104 ms