RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PSPHP1O15172 72 aa2.94□□□□□ -1.94
HERPUD1-206ENST00000563343 KRTAP19-7Q3SYF9 63 aa2.93□□□□□ -1.94
HERPUD1-206ENST00000563343 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
HERPUD1-206ENST00000563343 ADM2Q7Z4H4 148 aa2.93□□□□□ -1.94
HERPUD1-206ENST00000563343 CAMK2N1Q7Z7J9 78 aa2.93□□□□□ -1.94
HERPUD1-206ENST00000563343 COA5Q86WW8 74 aa2.93□□□□□ -1.94
HERPUD1-206ENST00000563343 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
HERPUD1-206ENST00000563343 LINC01558Q9Y6Z2 57 aa2.91□□□□□ -1.94
HERPUD1-206ENST00000563343 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
HERPUD1-206ENST00000563343 PMAIP1Q13794 54 aa2.9□□□□□ -1.95
HERPUD1-206ENST00000563343 PRR15LQ9BU68 103 aa2.9□□□□□ -1.95
HERPUD1-206ENST00000563343 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.95
HERPUD1-206ENST00000563343 CHKB-CPT1BH3BT56 60 aa2.89□□□□□ -1.95
HERPUD1-206ENST00000563343 MT1EP04732 61 aa2.89□□□□□ -1.95
HERPUD1-206ENST00000563343 ACYP2P14621 99 aa2.89□□□□□ -1.95
HERPUD1-206ENST00000563343 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
HERPUD1-206ENST00000563343 A6NED7 52 aa2.87□□□□□ -1.95
HERPUD1-206ENST00000563343 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
HERPUD1-206ENST00000563343 DMAC1Q96GE9 116 aa2.87□□□□□ -1.95
HERPUD1-206ENST00000563343 R4GN34 69 aa2.87□□□□□ -1.95
HERPUD1-206ENST00000563343 P0C880 135 aa2.85□□□□□ -1.95
HERPUD1-206ENST00000563343 M0QZ58 72 aa2.84□□□□□ -1.95
HERPUD1-206ENST00000563343 MT1GP13640 62 aa2.82□□□□□ -1.96
HERPUD1-206ENST00000563343 SPTSSBQ8NFR3 76 aa2.82□□□□□ -1.96
HERPUD1-206ENST00000563343 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-206ENST00000563343 LINC01554Q52M75 96 aa2.8□□□□□ -1.96
HERPUD1-206ENST00000563343 A0A1B0GU69 56 aa2.79□□□□□ -1.96
HERPUD1-206ENST00000563343 MT1MQ8N339 61 aa2.79□□□□□ -1.96
HERPUD1-206ENST00000563343 UQCR11O14957 56 aa2.78□□□□□ -1.96
HERPUD1-206ENST00000563343 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
HERPUD1-206ENST00000563343 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
HERPUD1-206ENST00000563343 SPATA8Q6RVD6 105 aa2.76□□□□□ -1.97
HERPUD1-206ENST00000563343 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
HERPUD1-206ENST00000563343 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
HERPUD1-206ENST00000563343 MIR22HGQ0VDD5 57 aa2.73□□□□□ -1.97
HERPUD1-206ENST00000563343 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
HERPUD1-206ENST00000563343 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
HERPUD1-206ENST00000563343 MT1LQ93083 61 aa2.7□□□□□ -1.98
HERPUD1-206ENST00000563343 A8MU10 97 aa2.69□□□□□ -1.98
HERPUD1-206ENST00000563343 K7ERS5 55 aa2.67□□□□□ -1.98
HERPUD1-206ENST00000563343 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
HERPUD1-206ENST00000563343 A0A1B0GU33 70 aa2.62□□□□□ -1.99
HERPUD1-206ENST00000563343 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
HERPUD1-206ENST00000563343 A0A0D9SG42 100 aa2.6□□□□□ -1.99
HERPUD1-206ENST00000563343 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
HERPUD1-206ENST00000563343 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
HERPUD1-206ENST00000563343 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
HERPUD1-206ENST00000563343 KRTAP12-4P60329 112 aa2.58□□□□□ -2
HERPUD1-206ENST00000563343 KRTAP5-8O75690 187 aa2.57□□□□□ -2
HERPUD1-206ENST00000563343 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
HERPUD1-206ENST00000563343 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
HERPUD1-206ENST00000563343 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
HERPUD1-206ENST00000563343 KRTAP13-4Q3LI77 160 aa2.52□□□□□ -2.01
HERPUD1-206ENST00000563343 ROMO1P60602 79 aa2.51□□□□□ -2.01
HERPUD1-206ENST00000563343 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
HERPUD1-206ENST00000563343 C10orf95Q9H7T3 257 aa2.48□□□□□ -2.01
HERPUD1-206ENST00000563343 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
HERPUD1-206ENST00000563343 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
HERPUD1-206ENST00000563343 SPINT4Q6UDR6 99 aa2.41□□□□□ -2.02
HERPUD1-206ENST00000563343 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
HERPUD1-206ENST00000563343 KRTAP12-1P59990 96 aa2.37□□□□□ -2.03
HERPUD1-206ENST00000563343 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
HERPUD1-206ENST00000563343 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
HERPUD1-206ENST00000563343 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
HERPUD1-206ENST00000563343 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
HERPUD1-206ENST00000563343 MT1AP04731 61 aa2.28□□□□□ -2.04
HERPUD1-206ENST00000563343 TNP1P09430 55 aa2.26□□□□□ -2.05
HERPUD1-206ENST00000563343 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
HERPUD1-206ENST00000563343 INE1O15225 51 aa1.96□□□□□ -2.1
HERPUD1-206ENST00000563343 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
HERPUD1-206ENST00000563343 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
HERPUD1-206ENST00000563343 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
HERPUD1-206ENST00000563343 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
HERPUD1-206ENST00000563343 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
HERPUD1-206ENST00000563343 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
HERPUD1-206ENST00000563343 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
HERPUD1-206ENST00000563343 PRM1P04553 51 aa1.28□□□□□ -2.2
HERPUD1-206ENST00000563343 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 140 ms