RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FLNAP21333 2647 aaKnown RBP0.36□□□□□ -2.35
SHCBP1-202ENST00000563219 NBEAL1Q6ZS30 2694 aa0.36□□□□□ -2.35
SHCBP1-202ENST00000563219 ASPMQ8IZT6 3477 aa0.36□□□□□ -2.35
SHCBP1-202ENST00000563219 CENPEQ02224 2701 aa0.36□□□□□ -2.35
SHCBP1-202ENST00000563219 VPS13AQ96RL7 3174 aa0.35□□□□□ -2.35
SHCBP1-202ENST00000563219 SPG11Q96JI7 2443 aa0.35□□□□□ -2.35
SHCBP1-202ENST00000563219 LRP1BQ9NZR2 4599 aa0.35□□□□□ -2.35
SHCBP1-202ENST00000563219 TLN2Q9Y4G6 2542 aa0.35□□□□□ -2.35
SHCBP1-202ENST00000563219 MYO18BQ8IUG5 2567 aa0.35□□□□□ -2.35
SHCBP1-202ENST00000563219 GOLGB1Q14789 3259 aaKnown RBP0.35□□□□□ -2.35
SHCBP1-202ENST00000563219 CEP295Q9C0D2 2601 aa0.34□□□□□ -2.35
SHCBP1-202ENST00000563219 MT1EP04732 61 aa0.34□□□□□ -2.36
SHCBP1-202ENST00000563219 EYSQ5T1H1 3165 aa0.33□□□□□ -2.36
SHCBP1-202ENST00000563219 MYO15AQ9UKN7 3530 aa0.33□□□□□ -2.36
SHCBP1-202ENST00000563219 HERC1Q15751 4861 aa0.33□□□□□ -2.36
SHCBP1-202ENST00000563219 SYNE1Q8NF91 8797 aaKnown RBP0.33□□□□□ -2.36
SHCBP1-202ENST00000563219 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
SHCBP1-202ENST00000563219 MT1HP80294 61 aa0.33□□□□□ -2.36
SHCBP1-202ENST00000563219 FASNP49327 2511 aaKnown RBP0.33□□□□□ -2.36
SHCBP1-202ENST00000563219 MGAM2Q2M2H8 2515 aa0.33□□□□□ -2.36
SHCBP1-202ENST00000563219 MUC17Q685J3 4493 aa0.32□□□□□ -2.36
SHCBP1-202ENST00000563219 MT1LQ93083 61 aa0.32□□□□□ -2.36
SHCBP1-202ENST00000563219 UNC80Q8N2C7 3258 aa0.32□□□□□ -2.36
SHCBP1-202ENST00000563219 VCANP13611 3396 aa0.31□□□□□ -2.36
SHCBP1-202ENST00000563219 BRCA2P51587 3418 aa0.31□□□□□ -2.36
SHCBP1-202ENST00000563219 HMCN2Q8NDA2 5059 aa0.31□□□□□ -2.36
SHCBP1-202ENST00000563219 PCNTO95613 3336 aa0.31□□□□□ -2.36
SHCBP1-202ENST00000563219 EP400Q96L91 3159 aa0.31□□□□□ -2.36
SHCBP1-202ENST00000563219 WDFY3Q8IZQ1 3526 aa0.3□□□□□ -2.36
SHCBP1-202ENST00000563219 STARD9Q9P2P6 4700 aa0.3□□□□□ -2.36
SHCBP1-202ENST00000563219 KMT2DO14686 5537 aa0.3□□□□□ -2.36
SHCBP1-202ENST00000563219 SPRR2GQ9BYE4 73 aa0.29□□□□□ -2.36
SHCBP1-202ENST00000563219 IGSF10Q6WRI0 2623 aa0.29□□□□□ -2.36
SHCBP1-202ENST00000563219 MDN1Q9NU22 5596 aa0.29□□□□□ -2.36
SHCBP1-202ENST00000563219 DOPEY1Q5JWR5 2465 aa0.28□□□□□ -2.36
SHCBP1-202ENST00000563219 SSPOA2VEC9 5147 aa0.28□□□□□ -2.36
SHCBP1-202ENST00000563219 USH2AO75445 5202 aa0.27□□□□□ -2.37
SHCBP1-202ENST00000563219 MUC2Q02817 5179 aa0.27□□□□□ -2.37
SHCBP1-202ENST00000563219 MT1XP80297 61 aa0.27□□□□□ -2.37
SHCBP1-202ENST00000563219 SPTAN1Q13813 2472 aaKnown RBP0.27□□□□□ -2.37
SHCBP1-202ENST00000563219 DNAH14Q0VDD8 3507 aa0.27□□□□□ -2.37
SHCBP1-202ENST00000563219 CENPFP49454 3210 aa0.26□□□□□ -2.37
SHCBP1-202ENST00000563219 LRP2P98164 4655 aa0.26□□□□□ -2.37
SHCBP1-202ENST00000563219 STAB2Q8WWQ8 2551 aa0.25□□□□□ -2.37
SHCBP1-202ENST00000563219 KMT2CQ8NEZ4 4911 aaKnown RBP0.24□□□□□ -2.37
SHCBP1-202ENST00000563219 PCLOQ9Y6V0 5065 aa0.24□□□□□ -2.37
SHCBP1-202ENST00000563219 MT1GP13640 62 aa0.24□□□□□ -2.37
SHCBP1-202ENST00000563219 TLN1Q9Y490 2541 aaKnown RBP0.24□□□□□ -2.37
SHCBP1-202ENST00000563219 UBR4Q5T4S7 5183 aa0.23□□□□□ -2.37
SHCBP1-202ENST00000563219 KRTAP19-8Q3LI54 63 aa0.22□□□□□ -2.37
SHCBP1-202ENST00000563219 DNHD1Q96M86 4753 aa0.22□□□□□ -2.37
SHCBP1-202ENST00000563219 RNF213Q63HN8 5207 aa0.21□□□□□ -2.38
SHCBP1-202ENST00000563219 MT2AP02795 61 aa0.21□□□□□ -2.38
SHCBP1-202ENST00000563219 KRTAP19-7Q3SYF9 63 aa0.2□□□□□ -2.38
SHCBP1-202ENST00000563219 MT1MQ8N339 61 aa0.2□□□□□ -2.38
SHCBP1-202ENST00000563219 MYO9AB2RTY4 2548 aa0.19□□□□□ -2.38
SHCBP1-202ENST00000563219 MT1HL1P0DM35 61 aa0.19□□□□□ -2.38
SHCBP1-202ENST00000563219 HYDINQ4G0P3 5121 aa0.19□□□□□ -2.38
SHCBP1-202ENST00000563219 KRTAP6-1Q3LI64 71 aa0.18□□□□□ -2.38
SHCBP1-202ENST00000563219 CDH23Q9H251 3354 aa0.17□□□□□ -2.38
SHCBP1-202ENST00000563219 RYR1P21817 5038 aa0.16□□□□□ -2.38
SHCBP1-202ENST00000563219 BIRC6Q9NR09 4857 aa0.16□□□□□ -2.38
SHCBP1-202ENST00000563219 RYR3Q15413 4870 aa0.16□□□□□ -2.38
SHCBP1-202ENST00000563219 MT1BP07438 61 aa0.15□□□□□ -2.39
SHCBP1-202ENST00000563219 MUC12Q9UKN1 5478 aa0.15□□□□□ -2.39
SHCBP1-202ENST00000563219 DSTQ03001 7570 aaKnown RBP0.15□□□□□ -2.39
SHCBP1-202ENST00000563219 HERC2O95714 4834 aa0.14□□□□□ -2.39
SHCBP1-202ENST00000563219 MT1FP04733 61 aa0.13□□□□□ -2.39
SHCBP1-202ENST00000563219 KRTAP19-2Q3LHN2 52 aa0.13□□□□□ -2.39
SHCBP1-202ENST00000563219 NEBP20929 6669 aa0.12□□□□□ -2.39
SHCBP1-202ENST00000563219 EPPK1P58107 5090 aaKnown RBP0.11□□□□□ -2.39
SHCBP1-202ENST00000563219 KIAA1109Q2LD37 5005 aa0.11□□□□□ -2.39
SHCBP1-202ENST00000563219 MT4P47944 62 aa0.08□□□□□ -2.4
SHCBP1-202ENST00000563219 RYR2Q92736 4967 aa0.08□□□□□ -2.4
SHCBP1-202ENST00000563219 ABCA13Q86UQ4 5058 aa0.08□□□□□ -2.4
SHCBP1-202ENST00000563219 KRTAP20-2Q3LI61 65 aa0.07□□□□□ -2.4
SHCBP1-202ENST00000563219 KRTAP19-6Q3LI70 58 aa-0.08□□□□□ -2.42
SHCBP1-202ENST00000563219 KRTAP20-1Q3LI63 56 aa-0.12□□□□□ -2.43
Retrieved 78 of 20,778 RNA–protein pairs in 99.2 ms