RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
SNX29-201ENST00000562510 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.88
SNX29-201ENST00000562510 KRTAP12-2P59991 146 aa3.26□□□□□ -1.89
SNX29-201ENST00000562510 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
SNX29-201ENST00000562510 K7ERS5 55 aa3.24□□□□□ -1.89
SNX29-201ENST00000562510 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
SNX29-201ENST00000562510 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
SNX29-201ENST00000562510 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
SNX29-201ENST00000562510 MT1BP07438 61 aa3.23□□□□□ -1.89
SNX29-201ENST00000562510 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
SNX29-201ENST00000562510 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
SNX29-201ENST00000562510 CAMK2N1Q7Z7J9 78 aa3.17□□□□□ -1.9
SNX29-201ENST00000562510 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
SNX29-201ENST00000562510 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
SNX29-201ENST00000562510 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
SNX29-201ENST00000562510 KMT2DO14686 5537 aa3.13□□□□□ -1.91
SNX29-201ENST00000562510 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
SNX29-201ENST00000562510 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
SNX29-201ENST00000562510 ROMO1P60602 79 aa3.11□□□□□ -1.91
SNX29-201ENST00000562510 MT1XP80297 61 aa3.11□□□□□ -1.91
SNX29-201ENST00000562510 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
SNX29-201ENST00000562510 C10orf95Q9H7T3 257 aa3.11□□□□□ -1.91
SNX29-201ENST00000562510 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
SNX29-201ENST00000562510 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
SNX29-201ENST00000562510 PRO2289Q9P1D8 64 aa3.07□□□□□ -1.92
SNX29-201ENST00000562510 TNP1P09430 55 aa3.02□□□□□ -1.93
SNX29-201ENST00000562510 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
SNX29-201ENST00000562510 KTN1-AS1Q86SY8 53 aa3.01□□□□□ -1.93
SNX29-201ENST00000562510 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
SNX29-201ENST00000562510 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
SNX29-201ENST00000562510 SPRR2EP22531 72 aa2.95□□□□□ -1.94
SNX29-201ENST00000562510 SPRR2BP35325 72 aa2.95□□□□□ -1.94
SNX29-201ENST00000562510 SPRR2AP35326 72 aa2.95□□□□□ -1.94
SNX29-201ENST00000562510 LCE3AQ5TA76 89 aa2.94□□□□□ -1.94
SNX29-201ENST00000562510 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
SNX29-201ENST00000562510 PP632Q6XCG6 107 aa2.9□□□□□ -1.95
SNX29-201ENST00000562510 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
SNX29-201ENST00000562510 SPRR2DP22532 72 aa2.86□□□□□ -1.95
SNX29-201ENST00000562510 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
SNX29-201ENST00000562510 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
SNX29-201ENST00000562510 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
SNX29-201ENST00000562510 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
SNX29-201ENST00000562510 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
SNX29-201ENST00000562510 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
SNX29-201ENST00000562510 MT1EP04732 61 aa2.73□□□□□ -1.97
SNX29-201ENST00000562510 MT1LQ93083 61 aa2.67□□□□□ -1.98
SNX29-201ENST00000562510 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
SNX29-201ENST00000562510 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
SNX29-201ENST00000562510 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
SNX29-201ENST00000562510 MT1GP13640 62 aa2.62□□□□□ -1.99
SNX29-201ENST00000562510 MT1MQ8N339 61 aa2.57□□□□□ -2
SNX29-201ENST00000562510 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
SNX29-201ENST00000562510 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
SNX29-201ENST00000562510 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
SNX29-201ENST00000562510 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
SNX29-201ENST00000562510 MT4P47944 62 aa2.51□□□□□ -2.01
SNX29-201ENST00000562510 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
SNX29-201ENST00000562510 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
SNX29-201ENST00000562510 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
SNX29-201ENST00000562510 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
SNX29-201ENST00000562510 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
SNX29-201ENST00000562510 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
SNX29-201ENST00000562510 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
SNX29-201ENST00000562510 MT1AP04731 61 aa2.27□□□□□ -2.05
SNX29-201ENST00000562510 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
SNX29-201ENST00000562510 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
SNX29-201ENST00000562510 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
SNX29-201ENST00000562510 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
SNX29-201ENST00000562510 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
SNX29-201ENST00000562510 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
SNX29-201ENST00000562510 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
SNX29-201ENST00000562510 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
SNX29-201ENST00000562510 INE1O15225 51 aa1.93□□□□□ -2.1
SNX29-201ENST00000562510 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
SNX29-201ENST00000562510 PRM1P04553 51 aa1.61□□□□□ -2.15
SNX29-201ENST00000562510 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
SNX29-201ENST00000562510 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
SNX29-201ENST00000562510 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 107.3 ms