RNA–Protein interactions for RNA: ENST00000561838.1

ITGAM-203, Transcript of integrin subunit alpha M, humanhuman

TSL 4

Gene ITGAM, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-203ENST00000561838 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
ITGAM-203ENST00000561838 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
ITGAM-203ENST00000561838 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
ITGAM-203ENST00000561838 UQCR11O14957 56 aa4.9□□□□□ -1.63
ITGAM-203ENST00000561838 RPS28P62857 69 aaKnown RBP4.9□□□□□ -1.63
ITGAM-203ENST00000561838 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
ITGAM-203ENST00000561838 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
ITGAM-203ENST00000561838 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
ITGAM-203ENST00000561838 MT1EP04732 61 aa4.84□□□□□ -1.63
ITGAM-203ENST00000561838 MIR22HGQ0VDD5 57 aa4.84□□□□□ -1.63
ITGAM-203ENST00000561838 AHNAK2Q8IVF2 5795 aa4.83□□□□□ -1.64
ITGAM-203ENST00000561838 MT4P47944 62 aa4.8□□□□□ -1.64
ITGAM-203ENST00000561838 KRTAP5-10Q6L8G5 202 aa4.8□□□□□ -1.64
ITGAM-203ENST00000561838 MT1GP13640 62 aa4.79□□□□□ -1.64
ITGAM-203ENST00000561838 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
ITGAM-203ENST00000561838 A6NED7 52 aa4.78□□□□□ -1.64
ITGAM-203ENST00000561838 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
ITGAM-203ENST00000561838 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
ITGAM-203ENST00000561838 K7ERS5 55 aa4.69□□□□□ -1.66
ITGAM-203ENST00000561838 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
ITGAM-203ENST00000561838 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
ITGAM-203ENST00000561838 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
ITGAM-203ENST00000561838 MT1MQ8N339 61 aa4.64□□□□□ -1.67
ITGAM-203ENST00000561838 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
ITGAM-203ENST00000561838 TNP1P09430 55 aa4.6□□□□□ -1.67
ITGAM-203ENST00000561838 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
ITGAM-203ENST00000561838 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
ITGAM-203ENST00000561838 MT1LQ93083 61 aa4.56□□□□□ -1.68
ITGAM-203ENST00000561838 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
ITGAM-203ENST00000561838 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
ITGAM-203ENST00000561838 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
ITGAM-203ENST00000561838 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
ITGAM-203ENST00000561838 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
ITGAM-203ENST00000561838 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
ITGAM-203ENST00000561838 ROMO1P60602 79 aa4.43□□□□□ -1.7
ITGAM-203ENST00000561838 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
ITGAM-203ENST00000561838 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
ITGAM-203ENST00000561838 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
ITGAM-203ENST00000561838 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
ITGAM-203ENST00000561838 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
ITGAM-203ENST00000561838 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
ITGAM-203ENST00000561838 H3BS24 57 aa4.16□□□□□ -1.74
ITGAM-203ENST00000561838 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
ITGAM-203ENST00000561838 AHNAKQ09666 5890 aaKnown RBP4.16□□□□□ -1.74
ITGAM-203ENST00000561838 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
ITGAM-203ENST00000561838 MUC5ACP98088 5654 aa4.09□□□□□ -1.75
ITGAM-203ENST00000561838 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
ITGAM-203ENST00000561838 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
ITGAM-203ENST00000561838 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
ITGAM-203ENST00000561838 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
ITGAM-203ENST00000561838 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
ITGAM-203ENST00000561838 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
ITGAM-203ENST00000561838 MT1AP04731 61 aa3.9□□□□□ -1.79
ITGAM-203ENST00000561838 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
ITGAM-203ENST00000561838 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
ITGAM-203ENST00000561838 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
ITGAM-203ENST00000561838 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
ITGAM-203ENST00000561838 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
ITGAM-203ENST00000561838 MT3P25713 68 aa3.62□□□□□ -1.83
ITGAM-203ENST00000561838 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
ITGAM-203ENST00000561838 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
ITGAM-203ENST00000561838 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
ITGAM-203ENST00000561838 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
ITGAM-203ENST00000561838 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
ITGAM-203ENST00000561838 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
ITGAM-203ENST00000561838 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
ITGAM-203ENST00000561838 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
ITGAM-203ENST00000561838 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
ITGAM-203ENST00000561838 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
ITGAM-203ENST00000561838 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
ITGAM-203ENST00000561838 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
ITGAM-203ENST00000561838 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
ITGAM-203ENST00000561838 INE1O15225 51 aa2.72□□□□□ -1.97
ITGAM-203ENST00000561838 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
ITGAM-203ENST00000561838 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
ITGAM-203ENST00000561838 PRM1P04553 51 aa2.3□□□□□ -2.04
ITGAM-203ENST00000561838 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
ITGAM-203ENST00000561838 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 38.1 ms