RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 A0A0D9SG42 100 aa3.88□□□□□ -1.79
CLK3-205ENST00000561673 KRTAP19-7Q3SYF9 63 aa3.87□□□□□ -1.79
CLK3-205ENST00000561673 MT3P25713 68 aa3.86□□□□□ -1.79
CLK3-205ENST00000561673 SPATA8Q6RVD6 105 aa3.86□□□□□ -1.79
CLK3-205ENST00000561673 V9GYY9 64 aa3.85□□□□□ -1.79
CLK3-205ENST00000561673 A0A1B0GU33 70 aa3.84□□□□□ -1.79
CLK3-205ENST00000561673 MT1EP04732 61 aa3.84□□□□□ -1.79
CLK3-205ENST00000561673 SPINT4Q6UDR6 99 aa3.83□□□□□ -1.8
CLK3-205ENST00000561673 Q1T7F1 81 aa3.81□□□□□ -1.8
CLK3-205ENST00000561673 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
CLK3-205ENST00000561673 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
CLK3-205ENST00000561673 PRR15LQ9BU68 103 aa3.77□□□□□ -1.81
CLK3-205ENST00000561673 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
CLK3-205ENST00000561673 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
CLK3-205ENST00000561673 PSPHP1O15172 72 aa3.75□□□□□ -1.81
CLK3-205ENST00000561673 A0A1B0GU69 56 aa3.74□□□□□ -1.81
CLK3-205ENST00000561673 MT1GP13640 62 aa3.72□□□□□ -1.81
CLK3-205ENST00000561673 A8MU10 97 aa3.71□□□□□ -1.82
CLK3-205ENST00000561673 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
CLK3-205ENST00000561673 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
CLK3-205ENST00000561673 A6NED7 52 aa3.67□□□□□ -1.82
CLK3-205ENST00000561673 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
CLK3-205ENST00000561673 MT1LQ93083 61 aa3.66□□□□□ -1.82
CLK3-205ENST00000561673 MT1MQ8N339 61 aa3.65□□□□□ -1.83
CLK3-205ENST00000561673 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
CLK3-205ENST00000561673 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
CLK3-205ENST00000561673 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
CLK3-205ENST00000561673 UQCR11O14957 56 aa3.63□□□□□ -1.83
CLK3-205ENST00000561673 TNP1P09430 55 aa3.62□□□□□ -1.83
CLK3-205ENST00000561673 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
CLK3-205ENST00000561673 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
CLK3-205ENST00000561673 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
CLK3-205ENST00000561673 CDC42SE1Q9NRR8 79 aa3.58□□□□□ -1.84
CLK3-205ENST00000561673 MT4P47944 62 aa3.57□□□□□ -1.84
CLK3-205ENST00000561673 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
CLK3-205ENST00000561673 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
CLK3-205ENST00000561673 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
CLK3-205ENST00000561673 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
CLK3-205ENST00000561673 K7ERS5 55 aa3.48□□□□□ -1.85
CLK3-205ENST00000561673 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
CLK3-205ENST00000561673 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
CLK3-205ENST00000561673 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
CLK3-205ENST00000561673 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
CLK3-205ENST00000561673 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
CLK3-205ENST00000561673 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
CLK3-205ENST00000561673 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
CLK3-205ENST00000561673 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
CLK3-205ENST00000561673 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
CLK3-205ENST00000561673 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
CLK3-205ENST00000561673 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
CLK3-205ENST00000561673 ROMO1P60602 79 aa3.28□□□□□ -1.88
CLK3-205ENST00000561673 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
CLK3-205ENST00000561673 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
CLK3-205ENST00000561673 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
CLK3-205ENST00000561673 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
CLK3-205ENST00000561673 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
CLK3-205ENST00000561673 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
CLK3-205ENST00000561673 MT1AP04731 61 aa3.09□□□□□ -1.91
CLK3-205ENST00000561673 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
CLK3-205ENST00000561673 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
CLK3-205ENST00000561673 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
CLK3-205ENST00000561673 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
CLK3-205ENST00000561673 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
CLK3-205ENST00000561673 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
CLK3-205ENST00000561673 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
CLK3-205ENST00000561673 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
CLK3-205ENST00000561673 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
CLK3-205ENST00000561673 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
CLK3-205ENST00000561673 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
CLK3-205ENST00000561673 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
CLK3-205ENST00000561673 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
CLK3-205ENST00000561673 INE1O15225 51 aa2.22□□□□□ -2.05
CLK3-205ENST00000561673 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CLK3-205ENST00000561673 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
CLK3-205ENST00000561673 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
CLK3-205ENST00000561673 PRM1P04553 51 aa1.7□□□□□ -2.14
CLK3-205ENST00000561673 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
CLK3-205ENST00000561673 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 106.9 ms