RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 HCG22E2RYF7 251 aa1.21□□□□□ -2.22
HERC1-215ENST00000561436 SPATA45Q537H7 98 aa1.21□□□□□ -2.22
HERC1-215ENST00000561436 LOC101927531A0A1B0GV80 90 aa1.18□□□□□ -2.22
HERC1-215ENST00000561436 ACYP1P07311 99 aa1.18□□□□□ -2.22
HERC1-215ENST00000561436 CYP4F30PQ9H0H9 118 aa1.18□□□□□ -2.22
HERC1-215ENST00000561436 C14orf132Q9NPU4 83 aa1.18□□□□□ -2.22
HERC1-215ENST00000561436 UQCR10Q9UDW1 63 aa1.18□□□□□ -2.22
HERC1-215ENST00000561436 TRAV22A0A0B4J277 110 aa1.17□□□□□ -2.22
HERC1-215ENST00000561436 K7ERJ3 54 aa1.17□□□□□ -2.22
HERC1-215ENST00000561436 UBL5Q9BZL1 73 aa1.17□□□□□ -2.22
HERC1-215ENST00000561436 M0R143 59 aa1.16□□□□□ -2.22
HERC1-215ENST00000561436 ATOX1O00244 68 aa1.16□□□□□ -2.22
HERC1-215ENST00000561436 TSTD3H0UI37 97 aa1.14□□□□□ -2.23
HERC1-215ENST00000561436 M0QZ58 72 aa1.14□□□□□ -2.23
HERC1-215ENST00000561436 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
HERC1-215ENST00000561436 UQCRQO14949 82 aa1.13□□□□□ -2.23
HERC1-215ENST00000561436 MT1GP13640 62 aa1.13□□□□□ -2.23
HERC1-215ENST00000561436 TAX1BP3O14907 124 aa1.12□□□□□ -2.23
HERC1-215ENST00000561436 A0A087WVE0 104 aa1.11□□□□□ -2.23
HERC1-215ENST00000561436 MT1EP04732 61 aa1.11□□□□□ -2.23
HERC1-215ENST00000561436 KRTAP19-7Q3SYF9 63 aa1.11□□□□□ -2.23
HERC1-215ENST00000561436 PYY3Q5JQD4 70 aa1.11□□□□□ -2.23
HERC1-215ENST00000561436 SPTSSBQ8NFR3 76 aa1.1□□□□□ -2.23
HERC1-215ENST00000561436 MT-ATP8P03928 68 aa1.09□□□□□ -2.23
HERC1-215ENST00000561436 MT4P47944 62 aa1.09□□□□□ -2.23
HERC1-215ENST00000561436 ATP5EP2Q5VTU8 51 aa1.09□□□□□ -2.23
HERC1-215ENST00000561436 A0A1W2PPM0 123 aa1.08□□□□□ -2.24
HERC1-215ENST00000561436 INE1O15225 51 aa1.08□□□□□ -2.24
HERC1-215ENST00000561436 CDC42SE1Q9NRR8 79 aa1.08□□□□□ -2.24
HERC1-215ENST00000561436 H0Y9P7 68 aa1.07□□□□□ -2.24
HERC1-215ENST00000561436 DMAC1Q96GE9 116 aa1.07□□□□□ -2.24
HERC1-215ENST00000561436 SPCS1Q9Y6A9 102 aa1.07□□□□□ -2.24
HERC1-215ENST00000561436 K7EP34 96 aa1.06□□□□□ -2.24
HERC1-215ENST00000561436 MT1MQ8N339 61 aa1.05□□□□□ -2.24
HERC1-215ENST00000561436 F8W1H4 67 aa1.04□□□□□ -2.24
HERC1-215ENST00000561436 ACYP2P14621 99 aa1.04□□□□□ -2.24
HERC1-215ENST00000561436 KRTAP20-2Q3LI61 65 aa1.04□□□□□ -2.24
HERC1-215ENST00000561436 MT1LQ93083 61 aa1.04□□□□□ -2.24
HERC1-215ENST00000561436 LINC00208Q96KT6 92 aa1.04□□□□□ -2.24
HERC1-215ENST00000561436 C10orf95Q9H7T3 257 aa1.04□□□□□ -2.24
HERC1-215ENST00000561436 A0A0D9SG42 100 aa1.03□□□□□ -2.24
HERC1-215ENST00000561436 SMIM6P0DI80 62 aa1.03□□□□□ -2.24
HERC1-215ENST00000561436 KRTAP19-5Q3LI72 72 aa1.03□□□□□ -2.24
HERC1-215ENST00000561436 ROMO1P60602 79 aa1.02□□□□□ -2.25
HERC1-215ENST00000561436 GTF2H5Q6ZYL4 71 aa1.01□□□□□ -2.25
HERC1-215ENST00000561436 COL5A1-AS1Q5SY13 56 aa1□□□□□ -2.25
HERC1-215ENST00000561436 LINC00643Q86TS7 51 aa1□□□□□ -2.25
HERC1-215ENST00000561436 CHKB-CPT1BH3BT56 60 aa0.99□□□□□ -2.25
HERC1-215ENST00000561436 TNP1P09430 55 aa0.98□□□□□ -2.25
HERC1-215ENST00000561436 SCGB1A1P11684 91 aa0.98□□□□□ -2.25
HERC1-215ENST00000561436 COX7CP15954 63 aa0.98□□□□□ -2.25
HERC1-215ENST00000561436 ETDBQ3ZM63 59 aa0.98□□□□□ -2.25
HERC1-215ENST00000561436 SMIM20Q8N5G0 67 aa0.98□□□□□ -2.25
HERC1-215ENST00000561436 SERP1Q9Y6X1 66 aa0.96□□□□□ -2.26
HERC1-215ENST00000561436 J3QR89 54 aa0.91□□□□□ -2.26
HERC1-215ENST00000561436 MT1AP04731 61 aa0.9□□□□□ -2.27
HERC1-215ENST00000561436 SPATA8Q6RVD6 105 aa0.89□□□□□ -2.27
HERC1-215ENST00000561436 SYNE1Q8NF91 8797 aaKnown RBP0.89□□□□□ -2.27
HERC1-215ENST00000561436 SERP2Q8N6R1 65 aa0.87□□□□□ -2.27
HERC1-215ENST00000561436 MIR22HGQ0VDD5 57 aa0.86□□□□□ -2.27
HERC1-215ENST00000561436 A0A1B0GU69 56 aa0.85□□□□□ -2.27
HERC1-215ENST00000561436 LOC105371267A0A1B0GV96 52 aa0.85□□□□□ -2.27
HERC1-215ENST00000561436 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
HERC1-215ENST00000561436 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
HERC1-215ENST00000561436 PRR15LQ9BU68 103 aa0.85□□□□□ -2.27
HERC1-215ENST00000561436 H7BZZ5 65 aa0.84□□□□□ -2.27
HERC1-215ENST00000561436 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
HERC1-215ENST00000561436 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
HERC1-215ENST00000561436 UQCR11O14957 56 aa0.79□□□□□ -2.28
HERC1-215ENST00000561436 K7ERU9 68 aa0.78□□□□□ -2.28
HERC1-215ENST00000561436 LINC01558Q9Y6Z2 57 aa0.77□□□□□ -2.29
HERC1-215ENST00000561436 RPS28P62857 69 aaKnown RBP0.76□□□□□ -2.29
HERC1-215ENST00000561436 A0A1B0GV90 55 aa0.75□□□□□ -2.29
HERC1-215ENST00000561436 ATP5EP56381 51 aaPredicted RBP0.75□□□□□ -2.29
HERC1-215ENST00000561436 BRK1Q8WUW1 75 aa0.74□□□□□ -2.29
HERC1-215ENST00000561436 CCDC179H3BU77 68 aa0.58□□□□□ -2.32
HERC1-215ENST00000561436 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
HERC1-215ENST00000561436 PRM1P04553 51 aa0.29□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 18.7 ms