RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
LRRC28-221ENST00000561276 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
LRRC28-221ENST00000561276 TNP1P09430 55 aa3.97□□□□□ -1.77
LRRC28-221ENST00000561276 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
LRRC28-221ENST00000561276 KMT2DO14686 5537 aa3.95□□□□□ -1.78
LRRC28-221ENST00000561276 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
LRRC28-221ENST00000561276 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
LRRC28-221ENST00000561276 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
LRRC28-221ENST00000561276 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
LRRC28-221ENST00000561276 BRK1Q8WUW1 75 aa3.84□□□□□ -1.79
LRRC28-221ENST00000561276 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
LRRC28-221ENST00000561276 SPRR2EP22531 72 aa3.82□□□□□ -1.8
LRRC28-221ENST00000561276 SPRR2BP35325 72 aa3.82□□□□□ -1.8
LRRC28-221ENST00000561276 SPRR2AP35326 72 aa3.82□□□□□ -1.8
LRRC28-221ENST00000561276 ROMO1P60602 79 aa3.82□□□□□ -1.8
LRRC28-221ENST00000561276 KRTAP19-5Q3LI72 72 aa3.81□□□□□ -1.8
LRRC28-221ENST00000561276 MT1EP04732 61 aa3.78□□□□□ -1.8
LRRC28-221ENST00000561276 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
LRRC28-221ENST00000561276 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
LRRC28-221ENST00000561276 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
LRRC28-221ENST00000561276 SPRR2DP22532 72 aa3.7□□□□□ -1.82
LRRC28-221ENST00000561276 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
LRRC28-221ENST00000561276 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
LRRC28-221ENST00000561276 NEBP20929 6669 aa3.67□□□□□ -1.82
LRRC28-221ENST00000561276 MT1GP13640 62 aa3.67□□□□□ -1.82
LRRC28-221ENST00000561276 MT1LQ93083 61 aa3.66□□□□□ -1.82
LRRC28-221ENST00000561276 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
LRRC28-221ENST00000561276 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
LRRC28-221ENST00000561276 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
LRRC28-221ENST00000561276 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
LRRC28-221ENST00000561276 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
LRRC28-221ENST00000561276 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
LRRC28-221ENST00000561276 MT3P25713 68 aa3.62□□□□□ -1.83
LRRC28-221ENST00000561276 MT1MQ8N339 61 aa3.59□□□□□ -1.83
LRRC28-221ENST00000561276 PRO0628Q9UI54 55 aa3.58□□□□□ -1.84
LRRC28-221ENST00000561276 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
LRRC28-221ENST00000561276 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
LRRC28-221ENST00000561276 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
LRRC28-221ENST00000561276 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
LRRC28-221ENST00000561276 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
LRRC28-221ENST00000561276 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
LRRC28-221ENST00000561276 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
LRRC28-221ENST00000561276 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
LRRC28-221ENST00000561276 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
LRRC28-221ENST00000561276 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
LRRC28-221ENST00000561276 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
LRRC28-221ENST00000561276 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
LRRC28-221ENST00000561276 MT4P47944 62 aa3.22□□□□□ -1.89
LRRC28-221ENST00000561276 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
LRRC28-221ENST00000561276 MT1AP04731 61 aa3.11□□□□□ -1.91
LRRC28-221ENST00000561276 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
LRRC28-221ENST00000561276 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
LRRC28-221ENST00000561276 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
LRRC28-221ENST00000561276 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
LRRC28-221ENST00000561276 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
LRRC28-221ENST00000561276 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
LRRC28-221ENST00000561276 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
LRRC28-221ENST00000561276 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
LRRC28-221ENST00000561276 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
LRRC28-221ENST00000561276 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
LRRC28-221ENST00000561276 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
LRRC28-221ENST00000561276 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
LRRC28-221ENST00000561276 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
LRRC28-221ENST00000561276 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
LRRC28-221ENST00000561276 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
LRRC28-221ENST00000561276 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
LRRC28-221ENST00000561276 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
LRRC28-221ENST00000561276 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
LRRC28-221ENST00000561276 INE1O15225 51 aa2.33□□□□□ -2.04
LRRC28-221ENST00000561276 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
LRRC28-221ENST00000561276 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
LRRC28-221ENST00000561276 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
LRRC28-221ENST00000561276 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
LRRC28-221ENST00000561276 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
LRRC28-221ENST00000561276 PRM1P04553 51 aa1.98□□□□□ -2.09
LRRC28-221ENST00000561276 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
LRRC28-221ENST00000561276 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
LRRC28-221ENST00000561276 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 118 ms