RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
HERC1-210ENST00000560897 K7ERS5 55 aa3.91□□□□□ -1.78
HERC1-210ENST00000560897 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
HERC1-210ENST00000560897 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
HERC1-210ENST00000560897 PLAC4Q8WY50 150 aa3.91□□□□□ -1.78
HERC1-210ENST00000560897 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.78
HERC1-210ENST00000560897 A6NED7 52 aa3.89□□□□□ -1.79
HERC1-210ENST00000560897 ADM2Q7Z4H4 148 aa3.87□□□□□ -1.79
HERC1-210ENST00000560897 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
HERC1-210ENST00000560897 H0YAA0 97 aa3.85□□□□□ -1.79
HERC1-210ENST00000560897 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
HERC1-210ENST00000560897 MT4P47944 62 aa3.84□□□□□ -1.79
HERC1-210ENST00000560897 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
HERC1-210ENST00000560897 A8MU10 97 aa3.8□□□□□ -1.8
HERC1-210ENST00000560897 R4GN34 69 aa3.8□□□□□ -1.8
HERC1-210ENST00000560897 A0A1B0GU69 56 aa3.78□□□□□ -1.8
HERC1-210ENST00000560897 SPATA8Q6RVD6 105 aa3.78□□□□□ -1.8
HERC1-210ENST00000560897 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
HERC1-210ENST00000560897 M0QZ58 72 aa3.76□□□□□ -1.81
HERC1-210ENST00000560897 UQCR11O14957 56 aa3.75□□□□□ -1.81
HERC1-210ENST00000560897 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
HERC1-210ENST00000560897 P0C880 135 aa3.74□□□□□ -1.81
HERC1-210ENST00000560897 LINC01554Q52M75 96 aa3.73□□□□□ -1.81
HERC1-210ENST00000560897 A0A1B0GU33 70 aa3.71□□□□□ -1.82
HERC1-210ENST00000560897 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
HERC1-210ENST00000560897 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
HERC1-210ENST00000560897 A0A0D9SG42 100 aa3.62□□□□□ -1.83
HERC1-210ENST00000560897 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
HERC1-210ENST00000560897 MT1EP04732 61 aa3.55□□□□□ -1.84
HERC1-210ENST00000560897 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
HERC1-210ENST00000560897 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
HERC1-210ENST00000560897 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
HERC1-210ENST00000560897 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
HERC1-210ENST00000560897 MT1GP13640 62 aa3.51□□□□□ -1.85
HERC1-210ENST00000560897 MT3P25713 68 aa3.5□□□□□ -1.85
HERC1-210ENST00000560897 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
HERC1-210ENST00000560897 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
HERC1-210ENST00000560897 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
HERC1-210ENST00000560897 MT1MQ8N339 61 aa3.42□□□□□ -1.86
HERC1-210ENST00000560897 ROMO1P60602 79 aa3.41□□□□□ -1.86
HERC1-210ENST00000560897 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
HERC1-210ENST00000560897 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
HERC1-210ENST00000560897 TNP1P09430 55 aa3.33□□□□□ -1.88
HERC1-210ENST00000560897 KRTAP19-5Q3LI72 72 aa3.33□□□□□ -1.88
HERC1-210ENST00000560897 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
HERC1-210ENST00000560897 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
HERC1-210ENST00000560897 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
HERC1-210ENST00000560897 MT1LQ93083 61 aa3.3□□□□□ -1.88
HERC1-210ENST00000560897 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
HERC1-210ENST00000560897 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
HERC1-210ENST00000560897 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
HERC1-210ENST00000560897 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
HERC1-210ENST00000560897 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.91
HERC1-210ENST00000560897 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
HERC1-210ENST00000560897 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
HERC1-210ENST00000560897 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
HERC1-210ENST00000560897 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
HERC1-210ENST00000560897 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
HERC1-210ENST00000560897 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
HERC1-210ENST00000560897 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
HERC1-210ENST00000560897 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
HERC1-210ENST00000560897 INE1O15225 51 aa2.85□□□□□ -1.95
HERC1-210ENST00000560897 MT1AP04731 61 aa2.81□□□□□ -1.96
HERC1-210ENST00000560897 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
HERC1-210ENST00000560897 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
HERC1-210ENST00000560897 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
HERC1-210ENST00000560897 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
HERC1-210ENST00000560897 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
HERC1-210ENST00000560897 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
HERC1-210ENST00000560897 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
HERC1-210ENST00000560897 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
HERC1-210ENST00000560897 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
HERC1-210ENST00000560897 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
HERC1-210ENST00000560897 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
HERC1-210ENST00000560897 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
HERC1-210ENST00000560897 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
HERC1-210ENST00000560897 PRM1P04553 51 aa1.77□□□□□ -2.13
HERC1-210ENST00000560897 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 55.2 ms