RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 K7ERS5 55 aa5.66□□□□□ -1.5
RABGGTA-219ENST00000560871 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.5
RABGGTA-219ENST00000560871 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
RABGGTA-219ENST00000560871 MT1LQ93083 61 aa5.54□□□□□ -1.52
RABGGTA-219ENST00000560871 MT1GP13640 62 aa5.53□□□□□ -1.52
RABGGTA-219ENST00000560871 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
RABGGTA-219ENST00000560871 CDC42SE1Q9NRR8 79 aa5.48□□□□□ -1.53
RABGGTA-219ENST00000560871 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
RABGGTA-219ENST00000560871 MT1MQ8N339 61 aa5.47□□□□□ -1.53
RABGGTA-219ENST00000560871 PP632Q6XCG6 107 aa5.46□□□□□ -1.54
RABGGTA-219ENST00000560871 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
RABGGTA-219ENST00000560871 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
RABGGTA-219ENST00000560871 ROMO1P60602 79 aa5.36□□□□□ -1.55
RABGGTA-219ENST00000560871 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
RABGGTA-219ENST00000560871 LCE1DQ5T752 114 aa5.28□□□□□ -1.56
RABGGTA-219ENST00000560871 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
RABGGTA-219ENST00000560871 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
RABGGTA-219ENST00000560871 GPR98Q8WXG9 6306 aa5.19□□□□□ -1.58
RABGGTA-219ENST00000560871 MT4P47944 62 aa5.19□□□□□ -1.58
RABGGTA-219ENST00000560871 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
RABGGTA-219ENST00000560871 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
RABGGTA-219ENST00000560871 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
RABGGTA-219ENST00000560871 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
RABGGTA-219ENST00000560871 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
RABGGTA-219ENST00000560871 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
RABGGTA-219ENST00000560871 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
RABGGTA-219ENST00000560871 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
RABGGTA-219ENST00000560871 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
RABGGTA-219ENST00000560871 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
RABGGTA-219ENST00000560871 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
RABGGTA-219ENST00000560871 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
RABGGTA-219ENST00000560871 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
RABGGTA-219ENST00000560871 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
RABGGTA-219ENST00000560871 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
RABGGTA-219ENST00000560871 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
RABGGTA-219ENST00000560871 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
RABGGTA-219ENST00000560871 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
RABGGTA-219ENST00000560871 KRTAP5-7Q6L8G8 165 aa4.75□□□□□ -1.65
RABGGTA-219ENST00000560871 MT1AP04731 61 aa4.72□□□□□ -1.65
RABGGTA-219ENST00000560871 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
RABGGTA-219ENST00000560871 PRO0628Q9UI54 55 aa4.63□□□□□ -1.67
RABGGTA-219ENST00000560871 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
RABGGTA-219ENST00000560871 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
RABGGTA-219ENST00000560871 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
RABGGTA-219ENST00000560871 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
RABGGTA-219ENST00000560871 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
RABGGTA-219ENST00000560871 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
RABGGTA-219ENST00000560871 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
RABGGTA-219ENST00000560871 MT3P25713 68 aa4.28□□□□□ -1.72
RABGGTA-219ENST00000560871 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
RABGGTA-219ENST00000560871 SVIPQ8NHG7 77 aa4.15□□□□□ -1.75
RABGGTA-219ENST00000560871 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
RABGGTA-219ENST00000560871 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
RABGGTA-219ENST00000560871 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
RABGGTA-219ENST00000560871 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
RABGGTA-219ENST00000560871 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
RABGGTA-219ENST00000560871 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
RABGGTA-219ENST00000560871 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
RABGGTA-219ENST00000560871 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
RABGGTA-219ENST00000560871 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
RABGGTA-219ENST00000560871 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
RABGGTA-219ENST00000560871 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
RABGGTA-219ENST00000560871 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
RABGGTA-219ENST00000560871 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
RABGGTA-219ENST00000560871 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
RABGGTA-219ENST00000560871 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
RABGGTA-219ENST00000560871 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
RABGGTA-219ENST00000560871 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
RABGGTA-219ENST00000560871 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
RABGGTA-219ENST00000560871 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
RABGGTA-219ENST00000560871 PRM1P04553 51 aa2.77□□□□□ -1.97
RABGGTA-219ENST00000560871 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
RABGGTA-219ENST00000560871 H3BS24 57 aa2.73□□□□□ -1.97
RABGGTA-219ENST00000560871 INE1O15225 51 aa2.65□□□□□ -1.99
RABGGTA-219ENST00000560871 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
RABGGTA-219ENST00000560871 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
RABGGTA-219ENST00000560871 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
RABGGTA-219ENST00000560871 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 1391 ms