RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 TNP1P09430 55 aa3.27□□□□□ -1.89
CPNE6-218ENST00000560845 KRTAP4-8Q9BYQ9 185 aa3.26□□□□□ -1.89
CPNE6-218ENST00000560845 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
CPNE6-218ENST00000560845 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
CPNE6-218ENST00000560845 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
CPNE6-218ENST00000560845 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
CPNE6-218ENST00000560845 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
CPNE6-218ENST00000560845 KRTAP23-1A1A580 65 aa3.19□□□□□ -1.9
CPNE6-218ENST00000560845 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
CPNE6-218ENST00000560845 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
CPNE6-218ENST00000560845 SPRR2DP22532 72 aa3.18□□□□□ -1.9
CPNE6-218ENST00000560845 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
CPNE6-218ENST00000560845 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
CPNE6-218ENST00000560845 LCE3BQ5TA77 95 aa3.13□□□□□ -1.91
CPNE6-218ENST00000560845 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
CPNE6-218ENST00000560845 KRTAP4-8A0A0G2JLE6 195 aa3.09□□□□□ -1.91
CPNE6-218ENST00000560845 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
CPNE6-218ENST00000560845 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
CPNE6-218ENST00000560845 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
CPNE6-218ENST00000560845 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
CPNE6-218ENST00000560845 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
CPNE6-218ENST00000560845 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
CPNE6-218ENST00000560845 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
CPNE6-218ENST00000560845 KRTAP19-7Q3SYF9 63 aa2.97□□□□□ -1.93
CPNE6-218ENST00000560845 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.94
CPNE6-218ENST00000560845 KRTAP4-9Q9BYQ8 210 aa2.95□□□□□ -1.94
CPNE6-218ENST00000560845 MT1EP04732 61 aa2.93□□□□□ -1.94
CPNE6-218ENST00000560845 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
CPNE6-218ENST00000560845 LCE1DQ5T752 114 aa2.9□□□□□ -1.95
CPNE6-218ENST00000560845 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
CPNE6-218ENST00000560845 MT1LQ93083 61 aa2.87□□□□□ -1.95
CPNE6-218ENST00000560845 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
CPNE6-218ENST00000560845 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
CPNE6-218ENST00000560845 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
CPNE6-218ENST00000560845 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.95
CPNE6-218ENST00000560845 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
CPNE6-218ENST00000560845 KRTAP19-4Q3LI73 84 aa2.81□□□□□ -1.96
CPNE6-218ENST00000560845 MT4P47944 62 aa2.8□□□□□ -1.96
CPNE6-218ENST00000560845 LCE3CQ5T5A8 94 aa2.79□□□□□ -1.96
CPNE6-218ENST00000560845 LCE4AQ5TA78 99 aa2.79□□□□□ -1.96
CPNE6-218ENST00000560845 MT1GP13640 62 aa2.78□□□□□ -1.96
CPNE6-218ENST00000560845 MT1MQ8N339 61 aa2.76□□□□□ -1.97
CPNE6-218ENST00000560845 INE1O15225 51 aa2.73□□□□□ -1.97
CPNE6-218ENST00000560845 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
CPNE6-218ENST00000560845 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
CPNE6-218ENST00000560845 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
CPNE6-218ENST00000560845 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
CPNE6-218ENST00000560845 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
CPNE6-218ENST00000560845 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
CPNE6-218ENST00000560845 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
CPNE6-218ENST00000560845 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CPNE6-218ENST00000560845 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
CPNE6-218ENST00000560845 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
CPNE6-218ENST00000560845 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
CPNE6-218ENST00000560845 MT1AP04731 61 aa2.45□□□□□ -2.02
CPNE6-218ENST00000560845 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
CPNE6-218ENST00000560845 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
CPNE6-218ENST00000560845 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
CPNE6-218ENST00000560845 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
CPNE6-218ENST00000560845 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
CPNE6-218ENST00000560845 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
CPNE6-218ENST00000560845 MT3P25713 68 aa2.21□□□□□ -2.06
CPNE6-218ENST00000560845 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
CPNE6-218ENST00000560845 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
CPNE6-218ENST00000560845 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
CPNE6-218ENST00000560845 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
CPNE6-218ENST00000560845 LCE1EQ5T753 118 aa1.95□□□□□ -2.1
CPNE6-218ENST00000560845 PRM1P04553 51 aa1.92□□□□□ -2.1
CPNE6-218ENST00000560845 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
CPNE6-218ENST00000560845 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
CPNE6-218ENST00000560845 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
CPNE6-218ENST00000560845 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
CPNE6-218ENST00000560845 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
CPNE6-218ENST00000560845 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
CPNE6-218ENST00000560845 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
CPNE6-218ENST00000560845 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.18
CPNE6-218ENST00000560845 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
CPNE6-218ENST00000560845 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 59.2 ms