RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 NEBP20929 6669 aa2.11□□□□□ -2.07
TMOD3-207ENST00000560549 SPRR5A0A1B0GTR4 108 aa2.1□□□□□ -2.07
TMOD3-207ENST00000560549 SPATA8Q6RVD6 105 aa2.1□□□□□ -2.07
TMOD3-207ENST00000560549 MACF1Q9UPN3 7388 aaKnown RBP2.09□□□□□ -2.07
TMOD3-207ENST00000560549 KRTAP10-10P60014 251 aa2.09□□□□□ -2.07
TMOD3-207ENST00000560549 SPTSSBQ8NFR3 76 aa2.09□□□□□ -2.07
TMOD3-207ENST00000560549 USH2AO75445 5202 aa2.08□□□□□ -2.08
TMOD3-207ENST00000560549 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
TMOD3-207ENST00000560549 H1FX-AS1Q4G0G2 97 aa2.07□□□□□ -2.08
TMOD3-207ENST00000560549 S4R3F8 94 aa2.07□□□□□ -2.08
TMOD3-207ENST00000560549 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
TMOD3-207ENST00000560549 H0YAA0 97 aa2.07□□□□□ -2.08
TMOD3-207ENST00000560549 UQCR11O14957 56 aa2.07□□□□□ -2.08
TMOD3-207ENST00000560549 KRTAP19-2Q3LHN2 52 aa2.06□□□□□ -2.08
TMOD3-207ENST00000560549 MUC17Q685J3 4493 aa2.05□□□□□ -2.08
TMOD3-207ENST00000560549 KRTAP13-4Q3LI77 160 aa2.05□□□□□ -2.08
TMOD3-207ENST00000560549 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
TMOD3-207ENST00000560549 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
TMOD3-207ENST00000560549 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
TMOD3-207ENST00000560549 CSAG1Q6PB30 78 aa2.01□□□□□ -2.09
TMOD3-207ENST00000560549 A0A0D9SG42 100 aa1.99□□□□□ -2.09
TMOD3-207ENST00000560549 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
TMOD3-207ENST00000560549 KMT2DO14686 5537 aa1.96□□□□□ -2.1
TMOD3-207ENST00000560549 KRTAP12-1P59990 96 aa1.94□□□□□ -2.1
TMOD3-207ENST00000560549 MT1HP80294 61 aa1.94□□□□□ -2.1
TMOD3-207ENST00000560549 M0QZ58 72 aa1.93□□□□□ -2.1
TMOD3-207ENST00000560549 M0R2T5 61 aa1.92□□□□□ -2.1
TMOD3-207ENST00000560549 KRTAP20-1Q3LI63 56 aa1.92□□□□□ -2.1
TMOD3-207ENST00000560549 CRIPTQ9P021 101 aa1.92□□□□□ -2.1
TMOD3-207ENST00000560549 FLGP20930 4061 aaPredicted RBP1.91□□□□□ -2.1
TMOD3-207ENST00000560549 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.11
TMOD3-207ENST00000560549 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
TMOD3-207ENST00000560549 INE1O15225 51 aa1.88□□□□□ -2.11
TMOD3-207ENST00000560549 C10orf95Q9H7T3 257 aa1.87□□□□□ -2.11
TMOD3-207ENST00000560549 MT2AP02795 61 aa1.85□□□□□ -2.11
TMOD3-207ENST00000560549 MT1FP04733 61 aa1.85□□□□□ -2.11
TMOD3-207ENST00000560549 SPRR2GQ9BYE4 73 aa1.82□□□□□ -2.12
TMOD3-207ENST00000560549 KRTAP2-3P0C7H8 128 aa1.79□□□□□ -2.12
TMOD3-207ENST00000560549 KRTAP2-4Q9BYR9 128 aa1.79□□□□□ -2.12
TMOD3-207ENST00000560549 MT1BP07438 61 aa1.77□□□□□ -2.13
TMOD3-207ENST00000560549 KRTAP19-8Q3LI54 63 aa1.77□□□□□ -2.13
TMOD3-207ENST00000560549 PLAC4Q8WY50 150 aa1.75□□□□□ -2.13
TMOD3-207ENST00000560549 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
TMOD3-207ENST00000560549 MT1XP80297 61 aa1.73□□□□□ -2.13
TMOD3-207ENST00000560549 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
TMOD3-207ENST00000560549 TNP1P09430 55 aa1.71□□□□□ -2.14
TMOD3-207ENST00000560549 KRTAP19-6Q3LI70 58 aa1.71□□□□□ -2.14
TMOD3-207ENST00000560549 KRTAP2-1Q9BYU5 128 aa1.71□□□□□ -2.14
TMOD3-207ENST00000560549 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
TMOD3-207ENST00000560549 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
TMOD3-207ENST00000560549 KRTAP8-1Q8IUC2 63 aa1.63□□□□□ -2.15
TMOD3-207ENST00000560549 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
TMOD3-207ENST00000560549 KRTAP19-5Q3LI72 72 aa1.58□□□□□ -2.16
TMOD3-207ENST00000560549 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
TMOD3-207ENST00000560549 SPRR2EP22531 72 aa1.55□□□□□ -2.16
TMOD3-207ENST00000560549 SPRR2BP35325 72 aa1.55□□□□□ -2.16
TMOD3-207ENST00000560549 SPRR2AP35326 72 aa1.55□□□□□ -2.16
TMOD3-207ENST00000560549 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
TMOD3-207ENST00000560549 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
TMOD3-207ENST00000560549 MT1EP04732 61 aa1.5□□□□□ -2.17
TMOD3-207ENST00000560549 SPRR2DP22532 72 aa1.5□□□□□ -2.17
TMOD3-207ENST00000560549 SPRR2FQ96RM1 72 aa1.5□□□□□ -2.17
TMOD3-207ENST00000560549 MT1LQ93083 61 aa1.49□□□□□ -2.17
TMOD3-207ENST00000560549 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
TMOD3-207ENST00000560549 MT1MQ8N339 61 aa1.41□□□□□ -2.18
TMOD3-207ENST00000560549 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
TMOD3-207ENST00000560549 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
TMOD3-207ENST00000560549 MT1GP13640 62 aa1.38□□□□□ -2.19
TMOD3-207ENST00000560549 MT4P47944 62 aa1.37□□□□□ -2.19
TMOD3-207ENST00000560549 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
TMOD3-207ENST00000560549 MT1AP04731 61 aa1.24□□□□□ -2.21
TMOD3-207ENST00000560549 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
TMOD3-207ENST00000560549 KRTAP20-2Q3LI61 65 aa1.18□□□□□ -2.22
TMOD3-207ENST00000560549 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
TMOD3-207ENST00000560549 PRM1P04553 51 aa1.03□□□□□ -2.24
TMOD3-207ENST00000560549 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
TMOD3-207ENST00000560549 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
TMOD3-207ENST00000560549 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 119.9 ms