RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.54
SMAD3-214ENST00000560402 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
SMAD3-214ENST00000560402 TNP1P09430 55 aa5.42□□□□□ -1.54
SMAD3-214ENST00000560402 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
SMAD3-214ENST00000560402 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
SMAD3-214ENST00000560402 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.54
SMAD3-214ENST00000560402 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
SMAD3-214ENST00000560402 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
SMAD3-214ENST00000560402 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
SMAD3-214ENST00000560402 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
SMAD3-214ENST00000560402 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
SMAD3-214ENST00000560402 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
SMAD3-214ENST00000560402 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
SMAD3-214ENST00000560402 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
SMAD3-214ENST00000560402 MT1EP04732 61 aa5.06□□□□□ -1.6
SMAD3-214ENST00000560402 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
SMAD3-214ENST00000560402 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
SMAD3-214ENST00000560402 MT1GP13640 62 aa4.93□□□□□ -1.62
SMAD3-214ENST00000560402 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
SMAD3-214ENST00000560402 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
SMAD3-214ENST00000560402 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
SMAD3-214ENST00000560402 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
SMAD3-214ENST00000560402 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
SMAD3-214ENST00000560402 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
SMAD3-214ENST00000560402 MT1MQ8N339 61 aa4.83□□□□□ -1.64
SMAD3-214ENST00000560402 MT1LQ93083 61 aa4.8□□□□□ -1.64
SMAD3-214ENST00000560402 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
SMAD3-214ENST00000560402 MT4P47944 62 aa4.78□□□□□ -1.64
SMAD3-214ENST00000560402 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
SMAD3-214ENST00000560402 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
SMAD3-214ENST00000560402 KRTAP4-12Q9BQ66 201 aa4.71□□□□□ -1.66
SMAD3-214ENST00000560402 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
SMAD3-214ENST00000560402 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
SMAD3-214ENST00000560402 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
SMAD3-214ENST00000560402 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
SMAD3-214ENST00000560402 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
SMAD3-214ENST00000560402 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
SMAD3-214ENST00000560402 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
SMAD3-214ENST00000560402 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
SMAD3-214ENST00000560402 KRTAP5-7Q6L8G8 165 aa4.51□□□□□ -1.69
SMAD3-214ENST00000560402 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
SMAD3-214ENST00000560402 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
SMAD3-214ENST00000560402 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
SMAD3-214ENST00000560402 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
SMAD3-214ENST00000560402 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
SMAD3-214ENST00000560402 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
SMAD3-214ENST00000560402 H3BS24 57 aa4.29□□□□□ -1.72
SMAD3-214ENST00000560402 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
SMAD3-214ENST00000560402 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
SMAD3-214ENST00000560402 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
SMAD3-214ENST00000560402 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
SMAD3-214ENST00000560402 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
SMAD3-214ENST00000560402 MT1AP04731 61 aa4.1□□□□□ -1.75
SMAD3-214ENST00000560402 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
SMAD3-214ENST00000560402 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
SMAD3-214ENST00000560402 KRTAP5-8O75690 187 aa3.98□□□□□ -1.77
SMAD3-214ENST00000560402 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
SMAD3-214ENST00000560402 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
SMAD3-214ENST00000560402 INE1O15225 51 aa3.92□□□□□ -1.78
SMAD3-214ENST00000560402 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
SMAD3-214ENST00000560402 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
SMAD3-214ENST00000560402 MT3P25713 68 aa3.77□□□□□ -1.81
SMAD3-214ENST00000560402 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
SMAD3-214ENST00000560402 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
SMAD3-214ENST00000560402 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
SMAD3-214ENST00000560402 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
SMAD3-214ENST00000560402 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
SMAD3-214ENST00000560402 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
SMAD3-214ENST00000560402 PRM1P04553 51 aa2.99□□□□□ -1.93
SMAD3-214ENST00000560402 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
SMAD3-214ENST00000560402 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
SMAD3-214ENST00000560402 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
SMAD3-214ENST00000560402 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
SMAD3-214ENST00000560402 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
SMAD3-214ENST00000560402 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
SMAD3-214ENST00000560402 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
SMAD3-214ENST00000560402 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
SMAD3-214ENST00000560402 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 115.3 ms