RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 C10orf95Q9H7T3 257 aa8.76□□□□□ -1.01
CRNDE-209ENST00000560208 KRTAP19-7Q3SYF9 63 aa8.71□□□□□ -1.02
CRNDE-209ENST00000560208 KRTAP4-2Q9BYR5 136 aa8.69□□□□□ -1.02
CRNDE-209ENST00000560208 A6NED7 52 aa8.66□□□□□ -1.02
CRNDE-209ENST00000560208 TNP1P09430 55 aa8.66□□□□□ -1.02
CRNDE-209ENST00000560208 MT1EP04732 61 aa8.65□□□□□ -1.02
CRNDE-209ENST00000560208 LCE5AQ5TCM9 118 aa8.64□□□□□ -1.03
CRNDE-209ENST00000560208 K7ERS5 55 aa8.63□□□□□ -1.03
CRNDE-209ENST00000560208 LCE4AQ5TA78 99 aa8.61□□□□□ -1.03
CRNDE-209ENST00000560208 KRTAP19-3Q7Z4W3 81 aa8.6□□□□□ -1.03
CRNDE-209ENST00000560208 DSTQ03001 7570 aaKnown RBP8.59□□□□□ -1.03
CRNDE-209ENST00000560208 KRTAP19-5Q3LI72 72 aa8.51□□□□□ -1.05
CRNDE-209ENST00000560208 LCE3AQ5TA76 89 aa8.51□□□□□ -1.05
CRNDE-209ENST00000560208 KRTAP4-11Q9BYQ6 195 aa8.51□□□□□ -1.05
CRNDE-209ENST00000560208 MT1GP13640 62 aa8.4□□□□□ -1.06
CRNDE-209ENST00000560208 KRTAP19-4Q3LI73 84 aa8.39□□□□□ -1.07
CRNDE-209ENST00000560208 KRTAP25-1Q3LHN0 102 aa8.33□□□□□ -1.08
CRNDE-209ENST00000560208 PP632Q6XCG6 107 aa8.32□□□□□ -1.08
CRNDE-209ENST00000560208 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
CRNDE-209ENST00000560208 MT1LQ93083 61 aa8.25□□□□□ -1.09
CRNDE-209ENST00000560208 MT1MQ8N339 61 aa8.24□□□□□ -1.09
CRNDE-209ENST00000560208 GPR98Q8WXG9 6306 aa8.21□□□□□ -1.1
CRNDE-209ENST00000560208 KRTAP12-3P60328 96 aa8.16□□□□□ -1.1
CRNDE-209ENST00000560208 ROMO1P60602 79 aa8.11□□□□□ -1.11
CRNDE-209ENST00000560208 KRTAP4-3Q9BYR4 195 aa8.06□□□□□ -1.12
CRNDE-209ENST00000560208 MT4P47944 62 aa8.03□□□□□ -1.12
CRNDE-209ENST00000560208 HMCN1Q96RW7 5635 aa7.99□□□□□ -1.13
CRNDE-209ENST00000560208 KRTAP23-1A1A580 65 aa7.98□□□□□ -1.13
CRNDE-209ENST00000560208 KRTAP5-4Q6L8H1 288 aa7.92□□□□□ -1.14
CRNDE-209ENST00000560208 BRK1Q8WUW1 75 aa7.86□□□□□ -1.15
CRNDE-209ENST00000560208 H3BS24 57 aa7.85□□□□□ -1.15
CRNDE-209ENST00000560208 KRTAP5-3Q6L8H2 238 aa7.84□□□□□ -1.15
CRNDE-209ENST00000560208 AHNAK2Q8IVF2 5795 aa7.76□□□□□ -1.17
CRNDE-209ENST00000560208 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
CRNDE-209ENST00000560208 KRTAP5-10Q6L8G5 202 aa7.6□□□□□ -1.19
CRNDE-209ENST00000560208 KRTAP5-5Q701N2 237 aaPredicted RBP7.56□□□□□ -1.2
CRNDE-209ENST00000560208 LCE3CQ5T5A8 94 aa7.54□□□□□ -1.2
CRNDE-209ENST00000560208 KRTAP20-2Q3LI61 65 aa7.49□□□□□ -1.21
CRNDE-209ENST00000560208 SPRR5A0A1B0GTR4 108 aa7.43□□□□□ -1.22
CRNDE-209ENST00000560208 KRTAP12-4P60329 112 aa7.41□□□□□ -1.22
CRNDE-209ENST00000560208 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
CRNDE-209ENST00000560208 KRTAP5-7Q6L8G8 165 aa7.33□□□□□ -1.24
CRNDE-209ENST00000560208 SYNE1Q8NF91 8797 aaKnown RBP7.32□□□□□ -1.24
CRNDE-209ENST00000560208 KRTAP9-6A8MVA2 160 aa7.11□□□□□ -1.27
CRNDE-209ENST00000560208 PRO0628Q9UI54 55 aa7.11□□□□□ -1.27
CRNDE-209ENST00000560208 PRAC1Q96KF2 57 aa7.08□□□□□ -1.28
CRNDE-209ENST00000560208 MT1AP04731 61 aa7.01□□□□□ -1.29
CRNDE-209ENST00000560208 KRTAP6-1Q3LI64 71 aa6.98□□□□□ -1.29
CRNDE-209ENST00000560208 KRTAP5-2Q701N4 177 aa6.92□□□□□ -1.3
CRNDE-209ENST00000560208 KTN1-AS1Q86SY8 53 aa6.73□□□□□ -1.33
CRNDE-209ENST00000560208 KRTAP6-2Q3LI66 62 aa6.7□□□□□ -1.34
CRNDE-209ENST00000560208 KRTAP5-8O75690 187 aa6.64□□□□□ -1.35
CRNDE-209ENST00000560208 OBSCNQ5VST9 7968 aa6.55□□□□□ -1.36
CRNDE-209ENST00000560208 SVIPQ8NHG7 77 aa6.51□□□□□ -1.37
CRNDE-209ENST00000560208 MT3P25713 68 aa6.42□□□□□ -1.38
CRNDE-209ENST00000560208 MUC5BQ9HC84 5762 aaPredicted RBP6.38□□□□□ -1.39
CRNDE-209ENST00000560208 AHNAKQ09666 5890 aaKnown RBP6.37□□□□□ -1.39
CRNDE-209ENST00000560208 MUC5ACP98088 5654 aa6.35□□□□□ -1.39
CRNDE-209ENST00000560208 KRTAP5-1Q6L8H4 278 aa6.23□□□□□ -1.41
CRNDE-209ENST00000560208 LCE1EQ5T753 118 aa5.92□□□□□ -1.46
CRNDE-209ENST00000560208 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
CRNDE-209ENST00000560208 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.86□□□□□ -1.47
CRNDE-209ENST00000560208 KRTAP5-11Q6L8G4 156 aa5.72□□□□□ -1.49
CRNDE-209ENST00000560208 LCE1BQ5T7P3 118 aa5.6□□□□□ -1.51
CRNDE-209ENST00000560208 LCE3DQ9BYE3 92 aa5.52□□□□□ -1.53
CRNDE-209ENST00000560208 LCE1CQ5T751 118 aa5.5□□□□□ -1.53
CRNDE-209ENST00000560208 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
CRNDE-209ENST00000560208 NDUFAF8A1L188 74 aa5.09□□□□□ -1.59
CRNDE-209ENST00000560208 LCE1FQ5T754 118 aa4.88□□□□□ -1.63
CRNDE-209ENST00000560208 KRTAP4-4Q9BYR3 166 aa4.88□□□□□ -1.63
CRNDE-209ENST00000560208 KRTAP21-2Q3LI59 83 aa4.6□□□□□ -1.67
CRNDE-209ENST00000560208 PHGR1C9JFL3 82 aa4.44□□□□□ -1.7
CRNDE-209ENST00000560208 PRM1P04553 51 aa4.19□□□□□ -1.74
CRNDE-209ENST00000560208 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
CRNDE-209ENST00000560208 INE1O15225 51 aa4.08□□□□□ -1.76
CRNDE-209ENST00000560208 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
CRNDE-209ENST00000560208 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
CRNDE-209ENST00000560208 MUC16Q8WXI7 14507 aa2.88□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 269.6 ms