RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
RABGGTA-215ENST00000560207 SPRR2DP22532 72 aa4.4□□□□□ -1.71
RABGGTA-215ENST00000560207 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
RABGGTA-215ENST00000560207 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
RABGGTA-215ENST00000560207 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
RABGGTA-215ENST00000560207 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
RABGGTA-215ENST00000560207 MT1GP13640 62 aa4.36□□□□□ -1.71
RABGGTA-215ENST00000560207 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
RABGGTA-215ENST00000560207 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
RABGGTA-215ENST00000560207 MT1LQ93083 61 aa4.29□□□□□ -1.72
RABGGTA-215ENST00000560207 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
RABGGTA-215ENST00000560207 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
RABGGTA-215ENST00000560207 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
RABGGTA-215ENST00000560207 PRO0628Q9UI54 55 aa4.28□□□□□ -1.72
RABGGTA-215ENST00000560207 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
RABGGTA-215ENST00000560207 MT1MQ8N339 61 aa4.21□□□□□ -1.74
RABGGTA-215ENST00000560207 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
RABGGTA-215ENST00000560207 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
RABGGTA-215ENST00000560207 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
RABGGTA-215ENST00000560207 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
RABGGTA-215ENST00000560207 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
RABGGTA-215ENST00000560207 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
RABGGTA-215ENST00000560207 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
RABGGTA-215ENST00000560207 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
RABGGTA-215ENST00000560207 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
RABGGTA-215ENST00000560207 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
RABGGTA-215ENST00000560207 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
RABGGTA-215ENST00000560207 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
RABGGTA-215ENST00000560207 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
RABGGTA-215ENST00000560207 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
RABGGTA-215ENST00000560207 MT4P47944 62 aa3.77□□□□□ -1.81
RABGGTA-215ENST00000560207 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
RABGGTA-215ENST00000560207 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
RABGGTA-215ENST00000560207 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
RABGGTA-215ENST00000560207 MT1AP04731 61 aa3.69□□□□□ -1.82
RABGGTA-215ENST00000560207 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
RABGGTA-215ENST00000560207 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
RABGGTA-215ENST00000560207 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
RABGGTA-215ENST00000560207 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
RABGGTA-215ENST00000560207 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
RABGGTA-215ENST00000560207 H3BS24 57 aa3.6□□□□□ -1.83
RABGGTA-215ENST00000560207 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
RABGGTA-215ENST00000560207 KRTAP5-7Q6L8G8 165 aa3.54□□□□□ -1.84
RABGGTA-215ENST00000560207 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
RABGGTA-215ENST00000560207 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
RABGGTA-215ENST00000560207 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
RABGGTA-215ENST00000560207 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
RABGGTA-215ENST00000560207 MT3P25713 68 aa3.41□□□□□ -1.86
RABGGTA-215ENST00000560207 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
RABGGTA-215ENST00000560207 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
RABGGTA-215ENST00000560207 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
RABGGTA-215ENST00000560207 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
RABGGTA-215ENST00000560207 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
RABGGTA-215ENST00000560207 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
RABGGTA-215ENST00000560207 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
RABGGTA-215ENST00000560207 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
RABGGTA-215ENST00000560207 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
RABGGTA-215ENST00000560207 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
RABGGTA-215ENST00000560207 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
RABGGTA-215ENST00000560207 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
RABGGTA-215ENST00000560207 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
RABGGTA-215ENST00000560207 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
RABGGTA-215ENST00000560207 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
RABGGTA-215ENST00000560207 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
RABGGTA-215ENST00000560207 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
RABGGTA-215ENST00000560207 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
RABGGTA-215ENST00000560207 INE1O15225 51 aa2.66□□□□□ -1.98
RABGGTA-215ENST00000560207 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
RABGGTA-215ENST00000560207 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
RABGGTA-215ENST00000560207 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
RABGGTA-215ENST00000560207 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
RABGGTA-215ENST00000560207 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
RABGGTA-215ENST00000560207 PRM1P04553 51 aa2.24□□□□□ -2.05
RABGGTA-215ENST00000560207 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
RABGGTA-215ENST00000560207 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
RABGGTA-215ENST00000560207 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
RABGGTA-215ENST00000560207 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
RABGGTA-215ENST00000560207 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 91.5 ms