RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 SPATA8Q6RVD6 105 aa2.81□□□□□ -1.96
CLPX-206ENST00000560166 PRO0628Q9UI54 55 aa2.81□□□□□ -1.96
CLPX-206ENST00000560166 R4GN34 69 aa2.81□□□□□ -1.96
CLPX-206ENST00000560166 MT1FP04733 61 aa2.8□□□□□ -1.96
CLPX-206ENST00000560166 MIR22HGQ0VDD5 57 aa2.8□□□□□ -1.96
CLPX-206ENST00000560166 SPRR2GQ9BYE4 73 aa2.8□□□□□ -1.96
CLPX-206ENST00000560166 CDC42SE1Q9NRR8 79 aa2.8□□□□□ -1.96
CLPX-206ENST00000560166 A6NN06 94 aa2.79□□□□□ -1.96
CLPX-206ENST00000560166 KRTAP10-10P60014 251 aa2.79□□□□□ -1.96
CLPX-206ENST00000560166 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
CLPX-206ENST00000560166 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
CLPX-206ENST00000560166 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
CLPX-206ENST00000560166 NEBP20929 6669 aa2.78□□□□□ -1.96
CLPX-206ENST00000560166 KRTAP13-4Q3LI77 160 aa2.77□□□□□ -1.97
CLPX-206ENST00000560166 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
CLPX-206ENST00000560166 BRK1Q8WUW1 75 aa2.74□□□□□ -1.97
CLPX-206ENST00000560166 KRTAP19-8Q3LI54 63 aa2.73□□□□□ -1.97
CLPX-206ENST00000560166 K7ERS5 55 aa2.72□□□□□ -1.97
CLPX-206ENST00000560166 KRTAP12-2P59991 146 aa2.71□□□□□ -1.98
CLPX-206ENST00000560166 A0A0D9SG42 100 aa2.7□□□□□ -1.98
CLPX-206ENST00000560166 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
CLPX-206ENST00000560166 LINC01554Q52M75 96 aa2.7□□□□□ -1.98
CLPX-206ENST00000560166 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
CLPX-206ENST00000560166 PLAC4Q8WY50 150 aa2.66□□□□□ -1.98
CLPX-206ENST00000560166 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
CLPX-206ENST00000560166 KMT2DO14686 5537 aa2.65□□□□□ -1.98
CLPX-206ENST00000560166 MT1BP07438 61 aa2.65□□□□□ -1.99
CLPX-206ENST00000560166 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.99
CLPX-206ENST00000560166 MDN1Q9NU22 5596 aa2.64□□□□□ -1.99
CLPX-206ENST00000560166 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
CLPX-206ENST00000560166 PRO2289Q9P1D8 64 aa2.59□□□□□ -1.99
CLPX-206ENST00000560166 ROMO1P60602 79 aa2.58□□□□□ -2
CLPX-206ENST00000560166 MT1XP80297 61 aa2.56□□□□□ -2
CLPX-206ENST00000560166 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
CLPX-206ENST00000560166 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
CLPX-206ENST00000560166 SPRR2EP22531 72 aa2.54□□□□□ -2
CLPX-206ENST00000560166 SPRR2BP35325 72 aa2.54□□□□□ -2
CLPX-206ENST00000560166 SPRR2AP35326 72 aa2.54□□□□□ -2
CLPX-206ENST00000560166 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
CLPX-206ENST00000560166 C10orf95Q9H7T3 257 aa2.54□□□□□ -2
CLPX-206ENST00000560166 TNP1P09430 55 aa2.51□□□□□ -2.01
CLPX-206ENST00000560166 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
CLPX-206ENST00000560166 SPRR2FQ96RM1 72 aa2.48□□□□□ -2.01
CLPX-206ENST00000560166 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
CLPX-206ENST00000560166 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
CLPX-206ENST00000560166 SPRR2DP22532 72 aa2.45□□□□□ -2.02
CLPX-206ENST00000560166 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
CLPX-206ENST00000560166 KRTAP8-1Q8IUC2 63 aa2.38□□□□□ -2.03
CLPX-206ENST00000560166 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.03
CLPX-206ENST00000560166 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
CLPX-206ENST00000560166 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
CLPX-206ENST00000560166 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
CLPX-206ENST00000560166 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
CLPX-206ENST00000560166 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
CLPX-206ENST00000560166 MT1EP04732 61 aa2.25□□□□□ -2.05
CLPX-206ENST00000560166 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
CLPX-206ENST00000560166 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
CLPX-206ENST00000560166 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
CLPX-206ENST00000560166 MT1LQ93083 61 aa2.2□□□□□ -2.06
CLPX-206ENST00000560166 MT4P47944 62 aa2.19□□□□□ -2.06
CLPX-206ENST00000560166 MT1GP13640 62 aa2.18□□□□□ -2.06
CLPX-206ENST00000560166 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
CLPX-206ENST00000560166 MT1MQ8N339 61 aa2.12□□□□□ -2.07
CLPX-206ENST00000560166 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
CLPX-206ENST00000560166 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
CLPX-206ENST00000560166 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
CLPX-206ENST00000560166 MT1AP04731 61 aa1.89□□□□□ -2.11
CLPX-206ENST00000560166 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
CLPX-206ENST00000560166 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
CLPX-206ENST00000560166 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
CLPX-206ENST00000560166 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
CLPX-206ENST00000560166 SYNE1Q8NF91 8797 aaKnown RBP1.79□□□□□ -2.12
CLPX-206ENST00000560166 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
CLPX-206ENST00000560166 INE1O15225 51 aa1.65□□□□□ -2.15
CLPX-206ENST00000560166 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
CLPX-206ENST00000560166 PRM1P04553 51 aa1.31□□□□□ -2.2
CLPX-206ENST00000560166 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
CLPX-206ENST00000560166 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 33.7 ms