RNA–Protein interactions for RNA: ENST00000560067.1

USP3-AS1-205, USP3 antisense RNA 1, humanhuman

TSL 3

Gene USP3-AS1, Length 366 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-205ENST00000560067 UQCR11O14957 56 aa4.62□□□□□ -1.67
USP3-AS1-205ENST00000560067 MT1EP04732 61 aa4.6□□□□□ -1.67
USP3-AS1-205ENST00000560067 H3BS24 57 aa4.59□□□□□ -1.67
USP3-AS1-205ENST00000560067 TNP1P09430 55 aa4.59□□□□□ -1.67
USP3-AS1-205ENST00000560067 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
USP3-AS1-205ENST00000560067 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
USP3-AS1-205ENST00000560067 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
USP3-AS1-205ENST00000560067 V9GYY9 64 aa4.53□□□□□ -1.68
USP3-AS1-205ENST00000560067 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
USP3-AS1-205ENST00000560067 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
USP3-AS1-205ENST00000560067 PSPHP1O15172 72 aa4.48□□□□□ -1.69
USP3-AS1-205ENST00000560067 MT1GP13640 62 aa4.47□□□□□ -1.69
USP3-AS1-205ENST00000560067 Q1T7F1 81 aa4.47□□□□□ -1.69
USP3-AS1-205ENST00000560067 K7ERS5 55 aa4.45□□□□□ -1.7
USP3-AS1-205ENST00000560067 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
USP3-AS1-205ENST00000560067 MT1LQ93083 61 aa4.41□□□□□ -1.7
USP3-AS1-205ENST00000560067 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
USP3-AS1-205ENST00000560067 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
USP3-AS1-205ENST00000560067 MT1MQ8N339 61 aa4.37□□□□□ -1.71
USP3-AS1-205ENST00000560067 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
USP3-AS1-205ENST00000560067 A6NED7 52 aa4.34□□□□□ -1.71
USP3-AS1-205ENST00000560067 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
USP3-AS1-205ENST00000560067 PCP4P48539 62 aa4.32□□□□□ -1.72
USP3-AS1-205ENST00000560067 RPS28P62857 69 aaKnown RBP4.31□□□□□ -1.72
USP3-AS1-205ENST00000560067 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
USP3-AS1-205ENST00000560067 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
USP3-AS1-205ENST00000560067 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
USP3-AS1-205ENST00000560067 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
USP3-AS1-205ENST00000560067 MT4P47944 62 aa4.14□□□□□ -1.75
USP3-AS1-205ENST00000560067 ROMO1P60602 79 aa4.13□□□□□ -1.75
USP3-AS1-205ENST00000560067 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
USP3-AS1-205ENST00000560067 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
USP3-AS1-205ENST00000560067 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
USP3-AS1-205ENST00000560067 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
USP3-AS1-205ENST00000560067 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
USP3-AS1-205ENST00000560067 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
USP3-AS1-205ENST00000560067 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
USP3-AS1-205ENST00000560067 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
USP3-AS1-205ENST00000560067 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
USP3-AS1-205ENST00000560067 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
USP3-AS1-205ENST00000560067 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
USP3-AS1-205ENST00000560067 BRK1Q8WUW1 75 aa3.81□□□□□ -1.8
USP3-AS1-205ENST00000560067 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
USP3-AS1-205ENST00000560067 MT1AP04731 61 aa3.76□□□□□ -1.81
USP3-AS1-205ENST00000560067 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
USP3-AS1-205ENST00000560067 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
USP3-AS1-205ENST00000560067 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
USP3-AS1-205ENST00000560067 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
USP3-AS1-205ENST00000560067 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
USP3-AS1-205ENST00000560067 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
USP3-AS1-205ENST00000560067 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
USP3-AS1-205ENST00000560067 PMAIP1Q13794 54 aa3.59□□□□□ -1.83
USP3-AS1-205ENST00000560067 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
USP3-AS1-205ENST00000560067 MT3P25713 68 aa3.46□□□□□ -1.86
USP3-AS1-205ENST00000560067 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
USP3-AS1-205ENST00000560067 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
USP3-AS1-205ENST00000560067 PRO0628Q9UI54 55 aa3.36□□□□□ -1.87
USP3-AS1-205ENST00000560067 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
USP3-AS1-205ENST00000560067 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
USP3-AS1-205ENST00000560067 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
USP3-AS1-205ENST00000560067 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
USP3-AS1-205ENST00000560067 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
USP3-AS1-205ENST00000560067 SVIPQ8NHG7 77 aa3.09□□□□□ -1.91
USP3-AS1-205ENST00000560067 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
USP3-AS1-205ENST00000560067 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
USP3-AS1-205ENST00000560067 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
USP3-AS1-205ENST00000560067 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
USP3-AS1-205ENST00000560067 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
USP3-AS1-205ENST00000560067 LCE1FQ5T754 118 aa2.58□□□□□ -2
USP3-AS1-205ENST00000560067 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
USP3-AS1-205ENST00000560067 NDUFAF8A1L188 74 aa2.37□□□□□ -2.03
USP3-AS1-205ENST00000560067 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
USP3-AS1-205ENST00000560067 PRM1P04553 51 aa2.11□□□□□ -2.07
USP3-AS1-205ENST00000560067 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
USP3-AS1-205ENST00000560067 INE1O15225 51 aa1.92□□□□□ -2.1
USP3-AS1-205ENST00000560067 A0A0A0MQY5 61 aa1.91□□□□□ -2.1
USP3-AS1-205ENST00000560067 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
USP3-AS1-205ENST00000560067 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 65.8 ms