RNA–Protein interactions for RNA: ENST00000560008.5

MIR9-3HG-208, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-208ENST00000560008 ROMO1P60602 79 aa6.47□□□□□ -1.37
MIR9-3HG-208ENST00000560008 MT1EP04732 61 aa6.46□□□□□ -1.38
MIR9-3HG-208ENST00000560008 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
MIR9-3HG-208ENST00000560008 LCE5AQ5TCM9 118 aa6.43□□□□□ -1.38
MIR9-3HG-208ENST00000560008 TNP1P09430 55 aa6.38□□□□□ -1.39
MIR9-3HG-208ENST00000560008 KRTAP25-1Q3LHN0 102 aa6.35□□□□□ -1.39
MIR9-3HG-208ENST00000560008 KRTAP19-5Q3LI72 72 aa6.35□□□□□ -1.39
MIR9-3HG-208ENST00000560008 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
MIR9-3HG-208ENST00000560008 MT1GP13640 62 aa6.31□□□□□ -1.4
MIR9-3HG-208ENST00000560008 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
MIR9-3HG-208ENST00000560008 MT1LQ93083 61 aa6.18□□□□□ -1.42
MIR9-3HG-208ENST00000560008 DSTQ03001 7570 aaKnown RBP6.18□□□□□ -1.42
MIR9-3HG-208ENST00000560008 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
MIR9-3HG-208ENST00000560008 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
MIR9-3HG-208ENST00000560008 MT1MQ8N339 61 aa6.15□□□□□ -1.42
MIR9-3HG-208ENST00000560008 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
MIR9-3HG-208ENST00000560008 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
MIR9-3HG-208ENST00000560008 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
MIR9-3HG-208ENST00000560008 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
MIR9-3HG-208ENST00000560008 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
MIR9-3HG-208ENST00000560008 GPR98Q8WXG9 6306 aa5.93□□□□□ -1.46
MIR9-3HG-208ENST00000560008 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
MIR9-3HG-208ENST00000560008 MT4P47944 62 aa5.91□□□□□ -1.46
MIR9-3HG-208ENST00000560008 KRTAP5-4Q6L8H1 288 aa5.85□□□□□ -1.47
MIR9-3HG-208ENST00000560008 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
MIR9-3HG-208ENST00000560008 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
MIR9-3HG-208ENST00000560008 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
MIR9-3HG-208ENST00000560008 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
MIR9-3HG-208ENST00000560008 HMCN1Q96RW7 5635 aa5.71□□□□□ -1.5
MIR9-3HG-208ENST00000560008 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
MIR9-3HG-208ENST00000560008 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
MIR9-3HG-208ENST00000560008 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
MIR9-3HG-208ENST00000560008 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
MIR9-3HG-208ENST00000560008 KRTAP20-2Q3LI61 65 aa5.54□□□□□ -1.52
MIR9-3HG-208ENST00000560008 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
MIR9-3HG-208ENST00000560008 KRTAP5-10Q6L8G5 202 aa5.52□□□□□ -1.53
MIR9-3HG-208ENST00000560008 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
MIR9-3HG-208ENST00000560008 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
MIR9-3HG-208ENST00000560008 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
MIR9-3HG-208ENST00000560008 KRTAP5-7Q6L8G8 165 aa5.34□□□□□ -1.55
MIR9-3HG-208ENST00000560008 MT1AP04731 61 aa5.29□□□□□ -1.56
MIR9-3HG-208ENST00000560008 SYNE1Q8NF91 8797 aaKnown RBP5.22□□□□□ -1.57
MIR9-3HG-208ENST00000560008 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
MIR9-3HG-208ENST00000560008 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
MIR9-3HG-208ENST00000560008 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
MIR9-3HG-208ENST00000560008 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
MIR9-3HG-208ENST00000560008 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
MIR9-3HG-208ENST00000560008 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
MIR9-3HG-208ENST00000560008 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
MIR9-3HG-208ENST00000560008 MT3P25713 68 aa4.88□□□□□ -1.63
MIR9-3HG-208ENST00000560008 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
MIR9-3HG-208ENST00000560008 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
MIR9-3HG-208ENST00000560008 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
MIR9-3HG-208ENST00000560008 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
MIR9-3HG-208ENST00000560008 AHNAKQ09666 5890 aaKnown RBP4.59□□□□□ -1.67
MIR9-3HG-208ENST00000560008 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
MIR9-3HG-208ENST00000560008 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
MIR9-3HG-208ENST00000560008 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
MIR9-3HG-208ENST00000560008 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
MIR9-3HG-208ENST00000560008 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
MIR9-3HG-208ENST00000560008 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
MIR9-3HG-208ENST00000560008 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
MIR9-3HG-208ENST00000560008 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
MIR9-3HG-208ENST00000560008 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
MIR9-3HG-208ENST00000560008 INE1O15225 51 aa3.98□□□□□ -1.77
MIR9-3HG-208ENST00000560008 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
MIR9-3HG-208ENST00000560008 H3BS24 57 aa3.76□□□□□ -1.81
MIR9-3HG-208ENST00000560008 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
MIR9-3HG-208ENST00000560008 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
MIR9-3HG-208ENST00000560008 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
MIR9-3HG-208ENST00000560008 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
MIR9-3HG-208ENST00000560008 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
MIR9-3HG-208ENST00000560008 PRM1P04553 51 aa3.33□□□□□ -1.88
MIR9-3HG-208ENST00000560008 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
MIR9-3HG-208ENST00000560008 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
MIR9-3HG-208ENST00000560008 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
MIR9-3HG-208ENST00000560008 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
MIR9-3HG-208ENST00000560008 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 199.1 ms