RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 V9GYY9 64 aa4.24□□□□□ -1.73
HERC1-204ENST00000559715 PRR15LQ9BU68 103 aa4.23□□□□□ -1.73
HERC1-204ENST00000559715 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
HERC1-204ENST00000559715 Q1T7F1 81 aa4.2□□□□□ -1.74
HERC1-204ENST00000559715 SPATA8Q6RVD6 105 aa4.18□□□□□ -1.74
HERC1-204ENST00000559715 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
HERC1-204ENST00000559715 MT1EP04732 61 aa4.16□□□□□ -1.74
HERC1-204ENST00000559715 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
HERC1-204ENST00000559715 A0A0D9SG42 100 aa4.13□□□□□ -1.75
HERC1-204ENST00000559715 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
HERC1-204ENST00000559715 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
HERC1-204ENST00000559715 PSPHP1O15172 72 aa4.1□□□□□ -1.75
HERC1-204ENST00000559715 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
HERC1-204ENST00000559715 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
HERC1-204ENST00000559715 UQCR11O14957 56 aa4.09□□□□□ -1.75
HERC1-204ENST00000559715 A8MU10 97 aa4.08□□□□□ -1.76
HERC1-204ENST00000559715 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
HERC1-204ENST00000559715 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
HERC1-204ENST00000559715 MT1GP13640 62 aa4.02□□□□□ -1.77
HERC1-204ENST00000559715 A6NED7 52 aa4.01□□□□□ -1.77
HERC1-204ENST00000559715 MT4P47944 62 aa4□□□□□ -1.77
HERC1-204ENST00000559715 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
HERC1-204ENST00000559715 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
HERC1-204ENST00000559715 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
HERC1-204ENST00000559715 BRK1Q8WUW1 75 aa4□□□□□ -1.77
HERC1-204ENST00000559715 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
HERC1-204ENST00000559715 MT1MQ8N339 61 aa3.98□□□□□ -1.77
HERC1-204ENST00000559715 MT1LQ93083 61 aa3.93□□□□□ -1.78
HERC1-204ENST00000559715 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
HERC1-204ENST00000559715 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
HERC1-204ENST00000559715 K7ERS5 55 aa3.9□□□□□ -1.79
HERC1-204ENST00000559715 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
HERC1-204ENST00000559715 C10orf95Q9H7T3 257 aa3.9□□□□□ -1.79
HERC1-204ENST00000559715 TNP1P09430 55 aa3.86□□□□□ -1.79
HERC1-204ENST00000559715 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
HERC1-204ENST00000559715 MT3P25713 68 aa3.85□□□□□ -1.79
HERC1-204ENST00000559715 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
HERC1-204ENST00000559715 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
HERC1-204ENST00000559715 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
HERC1-204ENST00000559715 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
HERC1-204ENST00000559715 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
HERC1-204ENST00000559715 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
HERC1-204ENST00000559715 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
HERC1-204ENST00000559715 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
HERC1-204ENST00000559715 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
HERC1-204ENST00000559715 ROMO1P60602 79 aa3.67□□□□□ -1.82
HERC1-204ENST00000559715 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
HERC1-204ENST00000559715 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
HERC1-204ENST00000559715 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
HERC1-204ENST00000559715 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
HERC1-204ENST00000559715 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
HERC1-204ENST00000559715 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
HERC1-204ENST00000559715 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
HERC1-204ENST00000559715 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
HERC1-204ENST00000559715 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
HERC1-204ENST00000559715 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
HERC1-204ENST00000559715 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
HERC1-204ENST00000559715 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
HERC1-204ENST00000559715 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
HERC1-204ENST00000559715 MT1AP04731 61 aa3.32□□□□□ -1.88
HERC1-204ENST00000559715 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
HERC1-204ENST00000559715 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
HERC1-204ENST00000559715 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
HERC1-204ENST00000559715 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
HERC1-204ENST00000559715 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
HERC1-204ENST00000559715 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
HERC1-204ENST00000559715 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
HERC1-204ENST00000559715 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
HERC1-204ENST00000559715 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
HERC1-204ENST00000559715 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
HERC1-204ENST00000559715 INE1O15225 51 aa2.52□□□□□ -2.01
HERC1-204ENST00000559715 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
HERC1-204ENST00000559715 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
HERC1-204ENST00000559715 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
HERC1-204ENST00000559715 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
HERC1-204ENST00000559715 PRM1P04553 51 aa1.88□□□□□ -2.11
HERC1-204ENST00000559715 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
HERC1-204ENST00000559715 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 62.5 ms