RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
PSEN1-224ENST00000559361 BRK1Q8WUW1 75 aa6.49□□□□□ -1.37
PSEN1-224ENST00000559361 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
PSEN1-224ENST00000559361 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
PSEN1-224ENST00000559361 ROMO1P60602 79 aa6.4□□□□□ -1.38
PSEN1-224ENST00000559361 LCE5AQ5TCM9 118 aa6.29□□□□□ -1.4
PSEN1-224ENST00000559361 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
PSEN1-224ENST00000559361 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
PSEN1-224ENST00000559361 LCE1DQ5T752 114 aa6.26□□□□□ -1.41
PSEN1-224ENST00000559361 HMCN1Q96RW7 5635 aa6.23□□□□□ -1.41
PSEN1-224ENST00000559361 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
PSEN1-224ENST00000559361 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
PSEN1-224ENST00000559361 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
PSEN1-224ENST00000559361 KRTAP19-3Q7Z4W3 81 aa6.17□□□□□ -1.42
PSEN1-224ENST00000559361 PRO0628Q9UI54 55 aa6.16□□□□□ -1.42
PSEN1-224ENST00000559361 AHNAK2Q8IVF2 5795 aa6.15□□□□□ -1.43
PSEN1-224ENST00000559361 MT1EP04732 61 aa6.14□□□□□ -1.43
PSEN1-224ENST00000559361 PMAIP1Q13794 54 aa6.14□□□□□ -1.43
PSEN1-224ENST00000559361 KRTAP5-10Q6L8G5 202 aa6.11□□□□□ -1.43
PSEN1-224ENST00000559361 LCE4AQ5TA78 99 aa6.1□□□□□ -1.43
PSEN1-224ENST00000559361 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
PSEN1-224ENST00000559361 MT4P47944 62 aa6.08□□□□□ -1.44
PSEN1-224ENST00000559361 MT1GP13640 62 aa5.96□□□□□ -1.46
PSEN1-224ENST00000559361 KRTAP5-7Q6L8G8 165 aa5.95□□□□□ -1.46
PSEN1-224ENST00000559361 MT1LQ93083 61 aa5.95□□□□□ -1.46
PSEN1-224ENST00000559361 KRTAP5-4Q6L8H1 288 aa5.94□□□□□ -1.46
PSEN1-224ENST00000559361 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
PSEN1-224ENST00000559361 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
PSEN1-224ENST00000559361 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
PSEN1-224ENST00000559361 MT1MQ8N339 61 aa5.85□□□□□ -1.47
PSEN1-224ENST00000559361 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
PSEN1-224ENST00000559361 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
PSEN1-224ENST00000559361 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
PSEN1-224ENST00000559361 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
PSEN1-224ENST00000559361 PRAC1Q96KF2 57 aa5.7□□□□□ -1.5
PSEN1-224ENST00000559361 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
PSEN1-224ENST00000559361 SPRR5A0A1B0GTR4 108 aa5.61□□□□□ -1.51
PSEN1-224ENST00000559361 KRTAP20-2Q3LI61 65 aa5.61□□□□□ -1.51
PSEN1-224ENST00000559361 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
PSEN1-224ENST00000559361 KRTAP4-12Q9BQ66 201 aa5.48□□□□□ -1.53
PSEN1-224ENST00000559361 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
PSEN1-224ENST00000559361 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
PSEN1-224ENST00000559361 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
PSEN1-224ENST00000559361 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
PSEN1-224ENST00000559361 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
PSEN1-224ENST00000559361 MUC5BQ9HC84 5762 aaPredicted RBP5.18□□□□□ -1.58
PSEN1-224ENST00000559361 AHNAKQ09666 5890 aaKnown RBP5.17□□□□□ -1.58
PSEN1-224ENST00000559361 MUC5ACP98088 5654 aa5.16□□□□□ -1.58
PSEN1-224ENST00000559361 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
PSEN1-224ENST00000559361 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
PSEN1-224ENST00000559361 KRTAP5-8O75690 187 aa5.11□□□□□ -1.59
PSEN1-224ENST00000559361 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
PSEN1-224ENST00000559361 MT1AP04731 61 aa5.09□□□□□ -1.59
PSEN1-224ENST00000559361 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
PSEN1-224ENST00000559361 LUZP6Q538Z0 58 aa4.88□□□□□ -1.63
PSEN1-224ENST00000559361 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
PSEN1-224ENST00000559361 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
PSEN1-224ENST00000559361 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
PSEN1-224ENST00000559361 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
PSEN1-224ENST00000559361 MT3P25713 68 aa4.66□□□□□ -1.66
PSEN1-224ENST00000559361 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
PSEN1-224ENST00000559361 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
PSEN1-224ENST00000559361 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
PSEN1-224ENST00000559361 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
PSEN1-224ENST00000559361 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
PSEN1-224ENST00000559361 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
PSEN1-224ENST00000559361 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
PSEN1-224ENST00000559361 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
PSEN1-224ENST00000559361 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
PSEN1-224ENST00000559361 INE1O15225 51 aa3.67□□□□□ -1.82
PSEN1-224ENST00000559361 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
PSEN1-224ENST00000559361 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
PSEN1-224ENST00000559361 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
PSEN1-224ENST00000559361 PRM1P04553 51 aa3.26□□□□□ -1.89
PSEN1-224ENST00000559361 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
PSEN1-224ENST00000559361 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
PSEN1-224ENST00000559361 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
PSEN1-224ENST00000559361 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms