RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 NOP10Q9NPE3 64 aaKnown RBP2.02□□□□□ -2.09
CASC4-208ENST00000559151 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
CASC4-208ENST00000559151 WFDC10BQ8IUB3 73 aa2.01□□□□□ -2.09
CASC4-208ENST00000559151 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
CASC4-208ENST00000559151 LINC01556Q5JQF7 62 aa2□□□□□ -2.09
CASC4-208ENST00000559151 SPRR1AP35321 89 aa1.99□□□□□ -2.09
CASC4-208ENST00000559151 H1FX-AS1Q4G0G2 97 aa1.99□□□□□ -2.09
CASC4-208ENST00000559151 WFDC13Q8IUB5 93 aa1.99□□□□□ -2.09
CASC4-208ENST00000559151 SYNE2Q8WXH0 6885 aaKnown RBP1.99□□□□□ -2.09
CASC4-208ENST00000559151 USH2AO75445 5202 aa1.99□□□□□ -2.09
CASC4-208ENST00000559151 DEFB105AQ8NG35 78 aa1.97□□□□□ -2.09
CASC4-208ENST00000559151 KRTAP2-3P0C7H8 128 aa1.96□□□□□ -2.1
CASC4-208ENST00000559151 HTN1P15515 57 aa1.96□□□□□ -2.1
CASC4-208ENST00000559151 KRTAP2-4Q9BYR9 128 aa1.96□□□□□ -2.1
CASC4-208ENST00000559151 FLGP20930 4061 aaPredicted RBP1.96□□□□□ -2.1
CASC4-208ENST00000559151 POLR2KP53803 58 aaKnown RBP1.95□□□□□ -2.1
CASC4-208ENST00000559151 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
CASC4-208ENST00000559151 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
CASC4-208ENST00000559151 MT1HP80294 61 aa1.92□□□□□ -2.1
CASC4-208ENST00000559151 M0QY20 66 aa1.91□□□□□ -2.1
CASC4-208ENST00000559151 SPRR1BP22528 89 aa1.91□□□□□ -2.1
CASC4-208ENST00000559151 RPL39LQ96EH5 51 aaKnown RBP1.91□□□□□ -2.1
CASC4-208ENST00000559151 IGLV5-48A0A075B6I7 105 aa1.9□□□□□ -2.11
CASC4-208ENST00000559151 SPINK6Q6UWN8 80 aa1.9□□□□□ -2.11
CASC4-208ENST00000559151 RPL39P62891 51 aaKnown RBP1.89□□□□□ -2.11
CASC4-208ENST00000559151 KRTAP2-1Q9BYU5 128 aa1.87□□□□□ -2.11
CASC4-208ENST00000559151 NEBP20929 6669 aa1.87□□□□□ -2.11
CASC4-208ENST00000559151 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
CASC4-208ENST00000559151 KRTAP19-2Q3LHN2 52 aa1.85□□□□□ -2.11
CASC4-208ENST00000559151 MMP24-AS1A0A0U1RRL7 71 aa1.84□□□□□ -2.11
CASC4-208ENST00000559151 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
CASC4-208ENST00000559151 A0A096LNI7 61 aa1.83□□□□□ -2.12
CASC4-208ENST00000559151 M0R2T5 61 aa1.83□□□□□ -2.12
CASC4-208ENST00000559151 TOMM7Q9P0U1 55 aa1.83□□□□□ -2.12
CASC4-208ENST00000559151 PRLHP81277 87 aa1.81□□□□□ -2.12
CASC4-208ENST00000559151 KRTAP19-6Q3LI70 58 aa1.81□□□□□ -2.12
CASC4-208ENST00000559151 CLPSL2Q6UWE3 100 aa1.81□□□□□ -2.12
CASC4-208ENST00000559151 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
CASC4-208ENST00000559151 KMT2DO14686 5537 aa1.8□□□□□ -2.12
CASC4-208ENST00000559151 S4R3F8 94 aa1.78□□□□□ -2.12
CASC4-208ENST00000559151 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
CASC4-208ENST00000559151 SPRR2EP22531 72 aa1.68□□□□□ -2.14
CASC4-208ENST00000559151 SPRR2BP35325 72 aa1.68□□□□□ -2.14
CASC4-208ENST00000559151 SPRR2AP35326 72 aa1.68□□□□□ -2.14
CASC4-208ENST00000559151 MT2AP02795 61 aa1.66□□□□□ -2.14
CASC4-208ENST00000559151 RPS29P62273 56 aaKnown RBP1.66□□□□□ -2.14
CASC4-208ENST00000559151 SPINK1P00995 79 aa1.65□□□□□ -2.15
CASC4-208ENST00000559151 MT1FP04733 61 aa1.65□□□□□ -2.15
CASC4-208ENST00000559151 SPRR2DP22532 72 aa1.63□□□□□ -2.15
CASC4-208ENST00000559151 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.15
CASC4-208ENST00000559151 C9orf92A6NGG3 77 aa1.56□□□□□ -2.16
CASC4-208ENST00000559151 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
CASC4-208ENST00000559151 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
CASC4-208ENST00000559151 MT4P47944 62 aa1.48□□□□□ -2.17
CASC4-208ENST00000559151 M0QZ58 72 aa1.46□□□□□ -2.18
CASC4-208ENST00000559151 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CASC4-208ENST00000559151 MT1BP07438 61 aa1.44□□□□□ -2.18
CASC4-208ENST00000559151 KRTAP19-8Q3LI54 63 aa1.41□□□□□ -2.18
CASC4-208ENST00000559151 KRTAP8-1Q8IUC2 63 aa1.41□□□□□ -2.18
CASC4-208ENST00000559151 SPRR2GQ9BYE4 73 aa1.39□□□□□ -2.19
CASC4-208ENST00000559151 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
CASC4-208ENST00000559151 TNP1P09430 55 aa1.34□□□□□ -2.19
CASC4-208ENST00000559151 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
CASC4-208ENST00000559151 MT1XP80297 61 aa1.31□□□□□ -2.2
CASC4-208ENST00000559151 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
CASC4-208ENST00000559151 PRM1P04553 51 aa1.25□□□□□ -2.21
CASC4-208ENST00000559151 KRTAP20-2Q3LI61 65 aa1.25□□□□□ -2.21
CASC4-208ENST00000559151 KRTAP19-7Q3SYF9 63 aa1.18□□□□□ -2.22
CASC4-208ENST00000559151 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CASC4-208ENST00000559151 SYNE1Q8NF91 8797 aaKnown RBP1.17□□□□□ -2.22
CASC4-208ENST00000559151 MT1EP04732 61 aa1.16□□□□□ -2.22
CASC4-208ENST00000559151 MT1GP13640 62 aa1.13□□□□□ -2.23
CASC4-208ENST00000559151 MT1MQ8N339 61 aa1.11□□□□□ -2.23
CASC4-208ENST00000559151 MT1LQ93083 61 aa1.07□□□□□ -2.24
CASC4-208ENST00000559151 KRTAP19-5Q3LI72 72 aa1.05□□□□□ -2.24
CASC4-208ENST00000559151 MT1AP04731 61 aa0.92□□□□□ -2.26
CASC4-208ENST00000559151 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
CASC4-208ENST00000559151 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 42.4 ms