RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 MT1XP80297 61 aa5.5□□□□□ -1.53
TMED3-205ENST00000558562 TNP1P09430 55 aa5.48□□□□□ -1.53
TMED3-205ENST00000558562 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
TMED3-205ENST00000558562 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
TMED3-205ENST00000558562 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
TMED3-205ENST00000558562 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
TMED3-205ENST00000558562 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
TMED3-205ENST00000558562 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
TMED3-205ENST00000558562 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
TMED3-205ENST00000558562 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
TMED3-205ENST00000558562 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
TMED3-205ENST00000558562 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
TMED3-205ENST00000558562 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
TMED3-205ENST00000558562 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
TMED3-205ENST00000558562 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
TMED3-205ENST00000558562 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
TMED3-205ENST00000558562 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
TMED3-205ENST00000558562 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
TMED3-205ENST00000558562 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
TMED3-205ENST00000558562 MT4P47944 62 aa4.93□□□□□ -1.62
TMED3-205ENST00000558562 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
TMED3-205ENST00000558562 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
TMED3-205ENST00000558562 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
TMED3-205ENST00000558562 KRTAP5-10Q6L8G5 202 aa4.87□□□□□ -1.63
TMED3-205ENST00000558562 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
TMED3-205ENST00000558562 MT1EP04732 61 aa4.84□□□□□ -1.63
TMED3-205ENST00000558562 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
TMED3-205ENST00000558562 MT1LQ93083 61 aa4.74□□□□□ -1.65
TMED3-205ENST00000558562 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
TMED3-205ENST00000558562 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
TMED3-205ENST00000558562 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
TMED3-205ENST00000558562 MT1GP13640 62 aa4.7□□□□□ -1.66
TMED3-205ENST00000558562 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
TMED3-205ENST00000558562 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
TMED3-205ENST00000558562 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
TMED3-205ENST00000558562 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
TMED3-205ENST00000558562 MT1MQ8N339 61 aa4.64□□□□□ -1.67
TMED3-205ENST00000558562 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
TMED3-205ENST00000558562 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
TMED3-205ENST00000558562 NDUFAF8A1L188 74 aa4.51□□□□□ -1.69
TMED3-205ENST00000558562 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
TMED3-205ENST00000558562 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
TMED3-205ENST00000558562 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
TMED3-205ENST00000558562 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
TMED3-205ENST00000558562 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
TMED3-205ENST00000558562 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
TMED3-205ENST00000558562 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
TMED3-205ENST00000558562 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
TMED3-205ENST00000558562 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
TMED3-205ENST00000558562 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
TMED3-205ENST00000558562 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
TMED3-205ENST00000558562 MT1AP04731 61 aa4.04□□□□□ -1.76
TMED3-205ENST00000558562 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
TMED3-205ENST00000558562 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
TMED3-205ENST00000558562 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
TMED3-205ENST00000558562 INE1O15225 51 aa3.93□□□□□ -1.78
TMED3-205ENST00000558562 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
TMED3-205ENST00000558562 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
TMED3-205ENST00000558562 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
TMED3-205ENST00000558562 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
TMED3-205ENST00000558562 MT3P25713 68 aa3.65□□□□□ -1.83
TMED3-205ENST00000558562 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
TMED3-205ENST00000558562 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
TMED3-205ENST00000558562 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
TMED3-205ENST00000558562 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
TMED3-205ENST00000558562 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
TMED3-205ENST00000558562 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
TMED3-205ENST00000558562 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
TMED3-205ENST00000558562 PRM1P04553 51 aa3.02□□□□□ -1.93
TMED3-205ENST00000558562 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
TMED3-205ENST00000558562 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
TMED3-205ENST00000558562 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
TMED3-205ENST00000558562 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
TMED3-205ENST00000558562 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
TMED3-205ENST00000558562 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
TMED3-205ENST00000558562 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
TMED3-205ENST00000558562 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
TMED3-205ENST00000558562 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 686.4 ms