RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
LRRC28-204ENST00000558172 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
LRRC28-204ENST00000558172 NEBP20929 6669 aa3.96□□□□□ -1.78
LRRC28-204ENST00000558172 ROMO1P60602 79 aa3.93□□□□□ -1.78
LRRC28-204ENST00000558172 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
LRRC28-204ENST00000558172 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
LRRC28-204ENST00000558172 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
LRRC28-204ENST00000558172 SPRR2EP22531 72 aa3.9□□□□□ -1.79
LRRC28-204ENST00000558172 SPRR2BP35325 72 aa3.9□□□□□ -1.79
LRRC28-204ENST00000558172 SPRR2AP35326 72 aa3.9□□□□□ -1.79
LRRC28-204ENST00000558172 MDN1Q9NU22 5596 aa3.9□□□□□ -1.79
LRRC28-204ENST00000558172 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
LRRC28-204ENST00000558172 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
LRRC28-204ENST00000558172 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
LRRC28-204ENST00000558172 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
LRRC28-204ENST00000558172 MT1EP04732 61 aa3.86□□□□□ -1.79
LRRC28-204ENST00000558172 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
LRRC28-204ENST00000558172 PP632Q6XCG6 107 aa3.79□□□□□ -1.8
LRRC28-204ENST00000558172 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
LRRC28-204ENST00000558172 SPRR2DP22532 72 aa3.77□□□□□ -1.81
LRRC28-204ENST00000558172 H3BS24 57 aa3.76□□□□□ -1.81
LRRC28-204ENST00000558172 MT1GP13640 62 aa3.75□□□□□ -1.81
LRRC28-204ENST00000558172 MT1LQ93083 61 aa3.74□□□□□ -1.81
LRRC28-204ENST00000558172 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
LRRC28-204ENST00000558172 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
LRRC28-204ENST00000558172 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
LRRC28-204ENST00000558172 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
LRRC28-204ENST00000558172 MT1MQ8N339 61 aa3.66□□□□□ -1.82
LRRC28-204ENST00000558172 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
LRRC28-204ENST00000558172 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
LRRC28-204ENST00000558172 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
LRRC28-204ENST00000558172 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
LRRC28-204ENST00000558172 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
LRRC28-204ENST00000558172 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
LRRC28-204ENST00000558172 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
LRRC28-204ENST00000558172 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
LRRC28-204ENST00000558172 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
LRRC28-204ENST00000558172 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
LRRC28-204ENST00000558172 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
LRRC28-204ENST00000558172 MT4P47944 62 aa3.26□□□□□ -1.89
LRRC28-204ENST00000558172 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
LRRC28-204ENST00000558172 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
LRRC28-204ENST00000558172 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
LRRC28-204ENST00000558172 MT1AP04731 61 aa3.2□□□□□ -1.9
LRRC28-204ENST00000558172 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
LRRC28-204ENST00000558172 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
LRRC28-204ENST00000558172 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
LRRC28-204ENST00000558172 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
LRRC28-204ENST00000558172 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
LRRC28-204ENST00000558172 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
LRRC28-204ENST00000558172 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
LRRC28-204ENST00000558172 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
LRRC28-204ENST00000558172 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
LRRC28-204ENST00000558172 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
LRRC28-204ENST00000558172 MT3P25713 68 aa2.93□□□□□ -1.94
LRRC28-204ENST00000558172 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
LRRC28-204ENST00000558172 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
LRRC28-204ENST00000558172 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
LRRC28-204ENST00000558172 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
LRRC28-204ENST00000558172 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
LRRC28-204ENST00000558172 LCE1EQ5T753 118 aa2.65□□□□□ -1.99
LRRC28-204ENST00000558172 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
LRRC28-204ENST00000558172 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
LRRC28-204ENST00000558172 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
LRRC28-204ENST00000558172 INE1O15225 51 aa2.58□□□□□ -2
LRRC28-204ENST00000558172 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
LRRC28-204ENST00000558172 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
LRRC28-204ENST00000558172 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
LRRC28-204ENST00000558172 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
LRRC28-204ENST00000558172 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
LRRC28-204ENST00000558172 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
LRRC28-204ENST00000558172 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
LRRC28-204ENST00000558172 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
LRRC28-204ENST00000558172 PRM1P04553 51 aa2.01□□□□□ -2.09
LRRC28-204ENST00000558172 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
LRRC28-204ENST00000558172 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
LRRC28-204ENST00000558172 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
LRRC28-204ENST00000558172 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 102.8 ms