RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 LCE5AQ5TCM9 118 aa9.22□□□□□ -0.93
SMAD6-202ENST00000557916 ROMO1P60602 79 aa9.22□□□□□ -0.93
SMAD6-202ENST00000557916 KRTAP12-3P60328 96 aa9.14□□□□□ -0.95
SMAD6-202ENST00000557916 MT1LQ93083 61 aa9.13□□□□□ -0.95
SMAD6-202ENST00000557916 MT1GP13640 62 aa9.12□□□□□ -0.95
SMAD6-202ENST00000557916 KRTAP23-1A1A580 65 aa9.09□□□□□ -0.95
SMAD6-202ENST00000557916 LCE3BQ5TA77 95 aa9.07□□□□□ -0.96
SMAD6-202ENST00000557916 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
SMAD6-202ENST00000557916 KRTAP2-2Q9BYT5 123 aa9.04□□□□□ -0.96
SMAD6-202ENST00000557916 KRTAP2-1Q9BYU5 128 aa9.04□□□□□ -0.96
SMAD6-202ENST00000557916 BRK1Q8WUW1 75 aa9.01□□□□□ -0.97
SMAD6-202ENST00000557916 MT1MQ8N339 61 aa8.97□□□□□ -0.97
SMAD6-202ENST00000557916 DSTQ03001 7570 aaKnown RBP8.84□□□□□ -0.99
SMAD6-202ENST00000557916 KRTAP4-3Q9BYR4 195 aa8.75□□□□□ -1.01
SMAD6-202ENST00000557916 KRTAP15-1Q3LI76 137 aa8.71□□□□□ -1.01
SMAD6-202ENST00000557916 KRTAP4-7Q9BYR0 210 aa8.71□□□□□ -1.01
SMAD6-202ENST00000557916 KRTAP19-4Q3LI73 84 aa8.65□□□□□ -1.02
SMAD6-202ENST00000557916 PMAIP1Q13794 54 aa8.51□□□□□ -1.05
SMAD6-202ENST00000557916 LCE3CQ5T5A8 94 aa8.47□□□□□ -1.05
SMAD6-202ENST00000557916 LCE4AQ5TA78 99 aa8.31□□□□□ -1.08
SMAD6-202ENST00000557916 KRTAP4-9Q9BYQ8 210 aa8.31□□□□□ -1.08
SMAD6-202ENST00000557916 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
SMAD6-202ENST00000557916 KRTAP5-4Q6L8H1 288 aa8.24□□□□□ -1.09
SMAD6-202ENST00000557916 LOC100996750A0A140TA64 210 aa8.23□□□□□ -1.09
SMAD6-202ENST00000557916 LCE1DQ5T752 114 aa8.18□□□□□ -1.1
SMAD6-202ENST00000557916 MT4P47944 62 aa8.16□□□□□ -1.1
SMAD6-202ENST00000557916 KRTAP5-5Q701N2 237 aaPredicted RBP8.16□□□□□ -1.1
SMAD6-202ENST00000557916 PRAC1Q96KF2 57 aa8.07□□□□□ -1.12
SMAD6-202ENST00000557916 HMCN1Q96RW7 5635 aa8.07□□□□□ -1.12
SMAD6-202ENST00000557916 KRTAP4-6Q9BYQ5 205 aa7.99□□□□□ -1.13
SMAD6-202ENST00000557916 KRTAP9-6A8MVA2 160 aa7.97□□□□□ -1.13
SMAD6-202ENST00000557916 GPR98Q8WXG9 6306 aa7.9□□□□□ -1.14
SMAD6-202ENST00000557916 KRTAP12-4P60329 112 aa7.85□□□□□ -1.15
SMAD6-202ENST00000557916 KTN1-AS1Q86SY8 53 aa7.81□□□□□ -1.16
SMAD6-202ENST00000557916 SYNE1Q8NF91 8797 aaKnown RBP7.81□□□□□ -1.16
SMAD6-202ENST00000557916 SPRR5A0A1B0GTR4 108 aa7.78□□□□□ -1.16
SMAD6-202ENST00000557916 MT1AP04731 61 aa7.77□□□□□ -1.17
SMAD6-202ENST00000557916 KRTAP20-2Q3LI61 65 aa7.76□□□□□ -1.17
SMAD6-202ENST00000557916 KRTAP6-1Q3LI64 71 aa7.69□□□□□ -1.18
SMAD6-202ENST00000557916 AHNAK2Q8IVF2 5795 aa7.56□□□□□ -1.2
SMAD6-202ENST00000557916 KRTAP5-3Q6L8H2 238 aa7.5□□□□□ -1.21
SMAD6-202ENST00000557916 KRTAP9-4Q9BYQ2 154 aa7.46□□□□□ -1.21
SMAD6-202ENST00000557916 SVIPQ8NHG7 77 aa7.44□□□□□ -1.22
SMAD6-202ENST00000557916 KRTAP5-10Q6L8G5 202 aa7.33□□□□□ -1.24
SMAD6-202ENST00000557916 KRTAP5-2Q701N4 177 aa7.31□□□□□ -1.24
SMAD6-202ENST00000557916 KRTAP6-2Q3LI66 62 aa7.27□□□□□ -1.25
SMAD6-202ENST00000557916 MT3P25713 68 aa7.1□□□□□ -1.27
SMAD6-202ENST00000557916 KRTAP5-7Q6L8G8 165 aa7.03□□□□□ -1.28
SMAD6-202ENST00000557916 KRTAP4-11Q9BYQ6 195 aa6.96□□□□□ -1.3
SMAD6-202ENST00000557916 LUZP6Q538Z0 58 aa6.74□□□□□ -1.33
SMAD6-202ENST00000557916 OBSCNQ5VST9 7968 aa6.72□□□□□ -1.33
SMAD6-202ENST00000557916 KRTAP5-8O75690 187 aa6.71□□□□□ -1.34
SMAD6-202ENST00000557916 KRTAP5-1Q6L8H4 278 aa6.46□□□□□ -1.38
SMAD6-202ENST00000557916 LCE1EQ5T753 118 aa6.38□□□□□ -1.39
SMAD6-202ENST00000557916 MUC5ACP98088 5654 aa6.34□□□□□ -1.39
SMAD6-202ENST00000557916 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
SMAD6-202ENST00000557916 LCE3DQ9BYE3 92 aa6.21□□□□□ -1.42
SMAD6-202ENST00000557916 MUC5BQ9HC84 5762 aaPredicted RBP6.2□□□□□ -1.42
SMAD6-202ENST00000557916 AHNAKQ09666 5890 aaKnown RBP6.19□□□□□ -1.42
SMAD6-202ENST00000557916 LCE1BQ5T7P3 118 aa5.99□□□□□ -1.45
SMAD6-202ENST00000557916 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
SMAD6-202ENST00000557916 LCE3EQ5T5B0 92 aa5.93□□□□□ -1.46
SMAD6-202ENST00000557916 LCE1CQ5T751 118 aa5.92□□□□□ -1.46
SMAD6-202ENST00000557916 NDUFAF8A1L188 74 aa5.89□□□□□ -1.47
SMAD6-202ENST00000557916 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.44□□□□□ -1.54
SMAD6-202ENST00000557916 KRTAP5-11Q6L8G4 156 aa5.31□□□□□ -1.56
SMAD6-202ENST00000557916 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
SMAD6-202ENST00000557916 KRTAP21-2Q3LI59 83 aa5.06□□□□□ -1.6
SMAD6-202ENST00000557916 LCE1FQ5T754 118 aa5.05□□□□□ -1.6
SMAD6-202ENST00000557916 A0A0A0MQY5 61 aa5□□□□□ -1.61
SMAD6-202ENST00000557916 INE1O15225 51 aa4.89□□□□□ -1.63
SMAD6-202ENST00000557916 PRM1P04553 51 aa4.73□□□□□ -1.65
SMAD6-202ENST00000557916 PHGR1C9JFL3 82 aa4.57□□□□□ -1.68
SMAD6-202ENST00000557916 KRTAP4-4Q9BYR3 166 aa4.57□□□□□ -1.68
SMAD6-202ENST00000557916 H3BS24 57 aa4.37□□□□□ -1.71
SMAD6-202ENST00000557916 MUC19Q7Z5P9 8384 aa4.11□□□□□ -1.75
SMAD6-202ENST00000557916 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.9
SMAD6-202ENST00000557916 MUC16Q8WXI7 14507 aa2.97□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 91.2 ms