RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 H0YAA0 97 aa0.76□□□□□ -2.29
TDP1-217ENST00000557782 DNAH5Q8TE73 4624 aa0.76□□□□□ -2.29
TDP1-217ENST00000557782 KMT2AQ03164 3969 aa0.76□□□□□ -2.29
TDP1-217ENST00000557782 PKD1P98161 4303 aa0.75□□□□□ -2.29
TDP1-217ENST00000557782 DNAH2Q9P225 4427 aa0.75□□□□□ -2.29
TDP1-217ENST00000557782 PKHD1P08F94 4074 aa0.75□□□□□ -2.29
TDP1-217ENST00000557782 SACSQ9NZJ4 4579 aa0.74□□□□□ -2.29
TDP1-217ENST00000557782 FAT4Q6V0I7 4981 aa0.74□□□□□ -2.29
TDP1-217ENST00000557782 PKHD1L1Q86WI1 4243 aa0.74□□□□□ -2.29
TDP1-217ENST00000557782 HMCN1Q96RW7 5635 aa0.74□□□□□ -2.29
TDP1-217ENST00000557782 VPS13BQ7Z7G8 4022 aa0.73□□□□□ -2.29
TDP1-217ENST00000557782 RPS29P62273 56 aaKnown RBP0.73□□□□□ -2.29
TDP1-217ENST00000557782 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
TDP1-217ENST00000557782 TNXBP22105 4242 aa0.72□□□□□ -2.29
TDP1-217ENST00000557782 APOBP04114 4563 aaKnown RBP0.72□□□□□ -2.29
TDP1-217ENST00000557782 LRP1BQ9NZR2 4599 aa0.71□□□□□ -2.3
TDP1-217ENST00000557782 FAT2Q9NYQ8 4349 aa0.71□□□□□ -2.3
TDP1-217ENST00000557782 C9orf92A6NGG3 77 aa0.71□□□□□ -2.3
TDP1-217ENST00000557782 SSPOA2VEC9 5147 aa0.71□□□□□ -2.3
TDP1-217ENST00000557782 DYNC1H1Q14204 4646 aaKnown RBP0.7□□□□□ -2.3
TDP1-217ENST00000557782 FCGBPQ9Y6R7 5405 aaPredicted RBP0.69□□□□□ -2.3
TDP1-217ENST00000557782 S4R3F8 94 aa0.69□□□□□ -2.3
TDP1-217ENST00000557782 FAT1Q14517 4588 aa0.69□□□□□ -2.3
TDP1-217ENST00000557782 LRP1Q07954 4544 aaKnown RBP0.68□□□□□ -2.3
TDP1-217ENST00000557782 SMR3BP02814 79 aaPredicted RBP0.68□□□□□ -2.3
TDP1-217ENST00000557782 KRTAP4-1Q9BYQ7 146 aa0.68□□□□□ -2.3
TDP1-217ENST00000557782 HSPG2P98160 4391 aa0.68□□□□□ -2.3
TDP1-217ENST00000557782 FAT3Q8TDW7 4589 aa0.67□□□□□ -2.3
TDP1-217ENST00000557782 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
TDP1-217ENST00000557782 FLGP20930 4061 aaPredicted RBP0.65□□□□□ -2.3
TDP1-217ENST00000557782 MYCBP2O75592 4640 aa0.65□□□□□ -2.3
TDP1-217ENST00000557782 MT1HL1P0DM35 61 aa0.65□□□□□ -2.31
TDP1-217ENST00000557782 DSTQ03001 7570 aaKnown RBP0.65□□□□□ -2.31
TDP1-217ENST00000557782 M0QZ58 72 aa0.64□□□□□ -2.31
TDP1-217ENST00000557782 LRP2P98164 4655 aa0.63□□□□□ -2.31
TDP1-217ENST00000557782 KRTAP19-2Q3LHN2 52 aa0.63□□□□□ -2.31
TDP1-217ENST00000557782 HMCN2Q8NDA2 5059 aa0.63□□□□□ -2.31
TDP1-217ENST00000557782 RNF213Q63HN8 5207 aa0.62□□□□□ -2.31
TDP1-217ENST00000557782 KRTAP5-10Q6L8G5 202 aa0.62□□□□□ -2.31
TDP1-217ENST00000557782 MUC17Q685J3 4493 aa0.61□□□□□ -2.31
TDP1-217ENST00000557782 LPAP08519 4548 aa0.61□□□□□ -2.31
TDP1-217ENST00000557782 KMT2DO14686 5537 aa0.6□□□□□ -2.31
TDP1-217ENST00000557782 MDN1Q9NU22 5596 aa0.59□□□□□ -2.32
TDP1-217ENST00000557782 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
TDP1-217ENST00000557782 TNP1P09430 55 aa0.58□□□□□ -2.32
TDP1-217ENST00000557782 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
TDP1-217ENST00000557782 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
TDP1-217ENST00000557782 SPRR2GQ9BYE4 73 aa0.57□□□□□ -2.32
TDP1-217ENST00000557782 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
TDP1-217ENST00000557782 M0R2T5 61 aa0.55□□□□□ -2.32
TDP1-217ENST00000557782 MT2AP02795 61 aa0.55□□□□□ -2.32
TDP1-217ENST00000557782 MT1FP04733 61 aa0.55□□□□□ -2.32
TDP1-217ENST00000557782 MT1BP07438 61 aa0.55□□□□□ -2.32
TDP1-217ENST00000557782 MT1XP80297 61 aa0.55□□□□□ -2.32
TDP1-217ENST00000557782 KRTAP19-8Q3LI54 63 aa0.55□□□□□ -2.32
TDP1-217ENST00000557782 KRTAP8-1Q8IUC2 63 aa0.55□□□□□ -2.32
TDP1-217ENST00000557782 MT1HP80294 61 aa0.54□□□□□ -2.32
TDP1-217ENST00000557782 USH2AO75445 5202 aa0.52□□□□□ -2.33
TDP1-217ENST00000557782 PRM1P04553 51 aa0.51□□□□□ -2.33
TDP1-217ENST00000557782 MUC12Q9UKN1 5478 aa0.51□□□□□ -2.33
TDP1-217ENST00000557782 KRTAP19-5Q3LI72 72 aa0.5□□□□□ -2.33
TDP1-217ENST00000557782 KRTAP19-6Q3LI70 58 aa0.49□□□□□ -2.33
TDP1-217ENST00000557782 KRTAP19-7Q3SYF9 63 aa0.48□□□□□ -2.33
TDP1-217ENST00000557782 SPRR2EP22531 72 aa0.47□□□□□ -2.33
TDP1-217ENST00000557782 SPRR2DP22532 72 aa0.47□□□□□ -2.33
TDP1-217ENST00000557782 SPRR2BP35325 72 aa0.47□□□□□ -2.33
TDP1-217ENST00000557782 SPRR2AP35326 72 aa0.47□□□□□ -2.33
TDP1-217ENST00000557782 MT1LQ93083 61 aa0.47□□□□□ -2.33
TDP1-217ENST00000557782 MT1EP04732 61 aa0.46□□□□□ -2.34
TDP1-217ENST00000557782 MT1GP13640 62 aa0.43□□□□□ -2.34
TDP1-217ENST00000557782 MT1MQ8N339 61 aa0.43□□□□□ -2.34
TDP1-217ENST00000557782 MT4P47944 62 aa0.41□□□□□ -2.34
TDP1-217ENST00000557782 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
TDP1-217ENST00000557782 MT1AP04731 61 aa0.4□□□□□ -2.35
TDP1-217ENST00000557782 KRTAP6-1Q3LI64 71 aa0.4□□□□□ -2.35
TDP1-217ENST00000557782 SPRR2FQ96RM1 72 aa0.4□□□□□ -2.35
TDP1-217ENST00000557782 KRTAP6-2Q3LI66 62 aa0.37□□□□□ -2.35
TDP1-217ENST00000557782 KRTAP20-2Q3LI61 65 aa0.31□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 30.5 ms