RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
GABRB3-213ENST00000557765 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
GABRB3-213ENST00000557765 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
GABRB3-213ENST00000557765 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
GABRB3-213ENST00000557765 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
GABRB3-213ENST00000557765 SVIPQ8NHG7 77 aa3.89□□□□□ -1.79
GABRB3-213ENST00000557765 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
GABRB3-213ENST00000557765 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
GABRB3-213ENST00000557765 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
GABRB3-213ENST00000557765 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
GABRB3-213ENST00000557765 MT1EP04732 61 aa3.84□□□□□ -1.79
GABRB3-213ENST00000557765 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
GABRB3-213ENST00000557765 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
GABRB3-213ENST00000557765 MT1GP13640 62 aa3.78□□□□□ -1.8
GABRB3-213ENST00000557765 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
GABRB3-213ENST00000557765 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
GABRB3-213ENST00000557765 MT1LQ93083 61 aa3.75□□□□□ -1.81
GABRB3-213ENST00000557765 KMT2DO14686 5537 aa3.71□□□□□ -1.82
GABRB3-213ENST00000557765 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
GABRB3-213ENST00000557765 SPRR2EP22531 72 aa3.66□□□□□ -1.82
GABRB3-213ENST00000557765 SPRR2BP35325 72 aa3.66□□□□□ -1.82
GABRB3-213ENST00000557765 SPRR2AP35326 72 aa3.66□□□□□ -1.82
GABRB3-213ENST00000557765 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
GABRB3-213ENST00000557765 MT1MQ8N339 61 aa3.62□□□□□ -1.83
GABRB3-213ENST00000557765 SPRR5A0A1B0GTR4 108 aa3.61□□□□□ -1.83
GABRB3-213ENST00000557765 SPRR2DP22532 72 aa3.56□□□□□ -1.84
GABRB3-213ENST00000557765 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
GABRB3-213ENST00000557765 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
GABRB3-213ENST00000557765 MDN1Q9NU22 5596 aa3.46□□□□□ -1.85
GABRB3-213ENST00000557765 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
GABRB3-213ENST00000557765 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
GABRB3-213ENST00000557765 NEBP20929 6669 aa3.43□□□□□ -1.86
GABRB3-213ENST00000557765 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
GABRB3-213ENST00000557765 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
GABRB3-213ENST00000557765 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
GABRB3-213ENST00000557765 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
GABRB3-213ENST00000557765 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
GABRB3-213ENST00000557765 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
GABRB3-213ENST00000557765 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
GABRB3-213ENST00000557765 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
GABRB3-213ENST00000557765 MT1AP04731 61 aa3.24□□□□□ -1.89
GABRB3-213ENST00000557765 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
GABRB3-213ENST00000557765 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
GABRB3-213ENST00000557765 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
GABRB3-213ENST00000557765 MT3P25713 68 aa2.99□□□□□ -1.93
GABRB3-213ENST00000557765 MT4P47944 62 aa2.99□□□□□ -1.93
GABRB3-213ENST00000557765 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
GABRB3-213ENST00000557765 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
GABRB3-213ENST00000557765 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
GABRB3-213ENST00000557765 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
GABRB3-213ENST00000557765 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
GABRB3-213ENST00000557765 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
GABRB3-213ENST00000557765 INE1O15225 51 aa2.82□□□□□ -1.96
GABRB3-213ENST00000557765 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
GABRB3-213ENST00000557765 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
GABRB3-213ENST00000557765 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
GABRB3-213ENST00000557765 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
GABRB3-213ENST00000557765 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
GABRB3-213ENST00000557765 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
GABRB3-213ENST00000557765 KRTAP5-8O75690 187 aa2.54□□□□□ -2
GABRB3-213ENST00000557765 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
GABRB3-213ENST00000557765 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
GABRB3-213ENST00000557765 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
GABRB3-213ENST00000557765 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
GABRB3-213ENST00000557765 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
GABRB3-213ENST00000557765 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
GABRB3-213ENST00000557765 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
GABRB3-213ENST00000557765 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
GABRB3-213ENST00000557765 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
GABRB3-213ENST00000557765 PRM1P04553 51 aa2.18□□□□□ -2.06
GABRB3-213ENST00000557765 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
GABRB3-213ENST00000557765 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
GABRB3-213ENST00000557765 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
GABRB3-213ENST00000557765 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
GABRB3-213ENST00000557765 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
GABRB3-213ENST00000557765 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
GABRB3-213ENST00000557765 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
GABRB3-213ENST00000557765 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 1387.4 ms